Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_006834_1                                                                                                                 top


Strain : Xanthomonas oryzae pv. oryzae KACC10331 RefSeq :NC_006834 (chromosome circular)
CRISPR id : NC_006834_1
DR consensus (31 bp) : GTTTCAATCCACGCGCCCGTGAGGACGCGACNumber of repetitions :60
Begin Position : 888612 End Position : 892516

888612GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCCAGCCTGCGCTGACACCGACCCCGGGCACTC 888676
888677GTTTCAATCCACGCGCCCGTGAGGACGCGACTCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG 888741
888742GTTTCAATCCACGCGCCCGTGAGGACGCGACGGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC 888808
888809GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCGGACAACATTGTGGGTCTTCCGGGATGCGGT 888873
888874GTTTCAATCCACGCGCCCGTGAGGACGCGACCCGTCAATCTGCTCGCCGTTGAACACCGTCGCAAA 888939
888940GTTTCAATCCACGCGCCCGTGAGGACGCGACTCGCACCGACAGCGCCCTGATTGAGTATGTGCAG 889004
889005GTTTCAATCCACGCGCCCGTGAGGACGCGACGTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT 889071
889072GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCTTCACGGGCCGTGGATACGTTACTACCCAT 889135
889136GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG 889201
889202GTTTCAATCCACGCGCCCGTGAGGACGCGACGTCATCGCCGCTTGGCTCTTCGAGCTAGTCAGCTT 889267
889268GTTTCAATCCACGCGCCCGTGAGGACGCGACGCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC 889332
889333GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC 889397
889398GTTTCAATCCACGCGCCCGTGAGGACGCGACATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC 889463
889464GTTTCAATCCACGCGCCCGTGAGGACGCGACGACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA 889529
889530GTTTCAATCCACGCGCCCGTGAGGACGCGACCGGGAGCGGTGTGTACTGCGCCGATACTCCGCGC 889594
889595GTTTCAATCCACGCGCCCGTGAGGACGCGACCGGCGCTACGTCCTGGCCTGCTGCATCGATGGC 889658
889659GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGCACAGCCGACAACGCCTGTTCCAGCACCATCAC 889725
889726GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGCTTGCTGATCTGCGCATGCGCGCTCATGAAAT 889791
889792GTTTCAATCCACGCGCCCGTGAGGACGCGACCTTAGAGCACCTTCCAGACCGCCACTACGGGCAAGA 889858
889859GTTTCAATCCACGCGCCCGTGAGGACGCGACGCCCACCTCTTGTCCACCGTGCGTGCTGCGCCAG 889923
889924GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGGGGTCGGCGCGATCTTTGGTGAAGTAGTGCAC 889989
889990GTTTCAATCCACGCGCCCGTGAGGACGCGACCCGGACGTAGCAACTACGGCCGCTATAGCGCGTG 890054
890055GTTTCAATCCACGCGCCCGTGAGGACGCGACGGAGTTGTGCGAAATGTCAGGCTTGGGCAAGCGC 890119
890120GTTTCAATCCACGCGCCCGTGAGGACGCGACCGGCCGGCTTGTCCAGTGATCGTGGTGGAGTTGTC 890185
890186GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGTCCTGCATACGCCCATTGTCGAATTGCGCCTC 890251
890252GTTTCAATCCACGCGCCCGTGAGGACGCGACGGTCGGCGGCGGCGAGCGCCGTTCAGGTGGTAGC 890316
890317GTTTCAATCCACGCGCCCGTGAGGACGCGACGTTCCCGCGGTGGGTGTATGCCAATAAGATCAAGCTT 890384
890385GTTTCAATCCACGCGCCCGTGAGGACGCGACCATAGGGGCATTCTCCGCCACAGATGCGCTGTCATT 890451
890452GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGGGGTCGGCGCGATCTTTGGTGAAGTAGTGCAC 890517
890518GTTTCAATCCACGCGCCCGTGAGGACGCGACAAGATTGACCGAAGTACCAGCGGCGGGCGTTGCGA 890583
890584GTTTCAATCCACGCGCCCGTGAGGACGCGACTACACCACTTACCCGACTCATCCTGCGTGCACGC 890648
890649GTTTCAATCCACGCGCCCGTGAGGACGCGACCTCCATTGCATCTAATACAGACTCATGTGGTAT 890712
890713GTTTCAATCCACGCGCCCGTGAGGACGCGACGCTAAGGATATTCCATTCTTGTACAACATCATCG 890777
890778GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGTGGGATCATCTGGGAGACTTCACTGGCTACT 890842
890843GTTTCAATCCACGCGCCCGTGAGGACGCGACTCAATATCAAGCTCGTAATCACCAGGCTGATACG 890907
890908GTTTCAATCCACGCGCCCGTGAGGACGCGACCCTTCCGGTACTTGTAGACAAACTCTTGAACCCGGA 890974
890975GTTTCAATCCACGCGCCCGTGAGGACGCGACTGATAGACGGCCAGATGTATTTACTGCCCGCAAGGA 891041
891042GTTTCAATCCACGCGCCCGTGAGGACGCGACCTGACCTCTGCTTAGGACTTGCCCAGTTGAAAGG 891106
891107GTTTCAATCCACGCGCCCGTGAGGACGCGACCTTTCCCACATCTCCATATCCGCCGTCTCCCAGAG 891172
891173GTTTCAATCCACGCGCCCGTGAGGACGCGACACGGACGGTCAGACGTGCATCCGGCGGGGTGAGG 891237
891238GTTTCAATCCACGCGCCCGTGAGGACGCGACCTGGGATGTCATTGCTACTGTCACAGATGCTGACG 891303
891304GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGGTCTATACAGTAACTGCGGATCTGACAGCA 891367
891368GTTTCAATCCACGCGCCCGTGAGGACGCGACGCTGCAATTGATGCTGCCCCAGCCCCGTAGGCTCTG 891434
891435GTTTCAATCCACGCGCCCGTGAGGACGCGACCTCAGCGGCCACTTCGCCGCAGCCTGGTAGGCCAA 891500
891501GTTTCAATCCACGCGCCCGTGAGGACGCGACTTCCGAACCTCCGGATCGATTGGTCGGGCGGAATA 891566
891567GTTTCAATCCACGCGCCCGTGAGGACGCGACGCGGCGGCGCGAAGTGGTCGGCGCAGTGGGACAC 891631
891632GTTTCAATCCACGCGCCCGTGAGGACGCGACGGACACGTTTCTTTTCCTTCCGGTATTTGTAGAT 891696
891697GTTTCAATCCACGCGCCCGTGAGGACGCGACTCCTGACTGATGATCAATATGATTCATTTGCAAA 891761
891762GTTTCAATCCACGCGCCCGTGAGGACGCGACGGTCGCCAAGCCGATGTCGCCGACGGCCGGATCGA 891827
891828GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCCAATGTTGACCGATGCTGCACGCCGGTCCTC 891892
891893GTTTCAATCCACGCGCCCGTGAGGACGCGACTCGCGCACAACGCCGCCTTCGACGCGCTCGTGTG 891957
891958GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCCGATCCAGCTGCCGACCTTGCCGAGGAACCCC 892023
892024GTTTCAATCCACGCGCCCGTGAGGACGCGACGCTGCAAAGACCATGCGGTTAAGGCGTGCTGGGA 892088
892089GTTTCAATCCACGCGCCCGTGAGGACGCGACTACATGACGTTCAATGACTCTGTGTCCGTGTCTGA 892154
892155GTTTCAATCCACGCGCCCGTGAGGACGCGACGTTTTGATTGCACCTGACAGGCGATAGCCCTGAG 892219
892220GTTTCAATCCACGCGCCCGTGAGGACGCGACGTAGGCGAGGGCGCGCCGGTAGGCCGTTCGATCAT 892285
892286GTTTCAATCCACGCGCCCGTGAGGACGCGACCGTCGTTTCACCGCATAGCTACACCAAAGGTGACGGC 892353
892354GTTTCAATCCACGCGCCCGTGAGGACGCGACCCATCACCGGGCGTGGAAGGTGGCGCGTCACCAACA 892420
892421GTTTCAATCCACGCGCCCGTGAGGACGCGACCCGCGTGCAGACGCTTTGACAGCGCGCAACACCT 892485
892486GTTTCAATCCACGCGCCCGTGAGGACGCGAC892516
Left flanking sequence : Till position 888612 (length bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 892516 (length bp)
CCCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGG
TTCCATGCCTTGCAAATATGAGCACCCGCG

Print the CRISPR sequence : From position bp To position bp