CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_007181_2
Flanking alignement tool
Page manual
  
Home Page
NC_007181_2                                                                                                                 
top
Strain :
Sulfolobus acidocaldarius DSM 639
RefSeq :
NC_007181 (chromosome circular)
CRISPR id :
NC_007181_2
DR consensus (24 bp) :
GTAATAACGACAAGAAACTAAAAC
Number of repetitions :
78
Begin Position :
1670962
End Position :
1675586
1670962
GTAATAACGACAAGAAACTAAAAC
ATCTTCTCTGTCCTCTACTACTTTCTGCTCTTCTTT
1671021
1671022
GTAATAACGACAAGAAACTAAAAC
TGAAAAGTTCATAAAAAAGTACCCTAACGTAGAACA
1671081
1671082
GTAATAACGACAAGAAACTAAAAC
AATTTTATGATATCGCTTTTGTTCAAGGAAACAT
1671139
1671140
GTAATAACGACAAGAAACTAAAAC
AATTCTAAGTGCACAAGAAGGACTAGAAGAGGCAGGCCT
1671202
1671203
GTAATAACGACAAGAAACTAAAAC
TAATGCCCAGTAACATAGATGCCTCCTTGATTAT
1671260
1671261
GTAATAACGACAAGAAACTAAAAC
AATTTGGATTGACGTCACCTCAAGATCTATTACCT
1671319
1671320
GTAATAACGACAAGAAACTAAAAC
ATATTTAAGCCTTACTCTTTACATTAAAAGTAACAA
1671379
1671380
GTAATAACGACAAGAAACTAAAAC
TCGACGTTAGTCTTAGATTTTTATCATTTTTAGGT
1671438
1671439
GTAATAACGACAAGAAACTAAAAC
TTGTGCTCTTTAATGTCAAACAGTGTGATCTATT
1671496
1671497
GTAATAACGACAAGAAACTAAAAC
ACAGTGCATGAAGTAGCATCATATGTCGTAAGTGA
1671555
1671556
GTAATAACGACAAGAAACTAAAAC
TCTCTGGGTTAAGTGCAAAGAGCACTGGGATTACAA
1671615
1671616
GTAATAACGACAAGAAACTAAAAC
CAACAAGGCTGAGAAGATAGCAAAGAAGCTAGTA
1671673
1671674
GTAATAACGACAAGAAACTAAAAC
TACAATAATTTCAGATTTCCAGTAAATGATACAAATTC
1671735
1671736
GTAATAACGACAAGAAACTAAAAC
TTGTCATTAAACTGACAACTTTGTCTCTGACCCAAA
1671795
1671796
GTAATAACGACAAGAAACTAAAAC
AGTAGCGGTATACAAAAATGTATTTGTTGTGATA
1671853
1671854
GTAATAACGACAAGAAACTAAAAC
TGGCTCACAGGCATTAATACCTGCAAAGCCTAGG
1671911
1671912
GTAATAACGACAAGAAACTAAAAC
AAAAGTTTGCCAATTTAGGTGCTGTGCAGGAAGCATTTA
1671974
1671975
GTAATAACGACAAGAAACTAAAAC
GAATAATTGTAGATCAGCCATCAACTTCCACACG
1672032
1672033
GTAATAACGACAAGAAACTAAAAC
AGAAAATGAGTAGTGAGATAAAGACAAAAAATAAGT
1672092
1672093
GTAATAACGACAAGAAACTAAAAC
AATTTCTATATAATCCAAGAGACACAGAGAGGTTTCTAC
1672155
1672156
GTAATAACGACAAGAAACTAAAAC
TACATTACTTTTAGAAATATAGTATGAGCGTAACATA
1672216
1672217
GTAATAACGACAAGAAACTAAAAC
CAGTACACAAAGTGGATAGGAAAAGTCAACAAT
1672273
1672274
GTAATAACGACAAGAAACTAAAAC
ATCGTATATTATATTGGGGCAGAAAAAATGAATGAT
1672333
1672334
GTAATAACGACAAGAAACTAAAAC
CAGGTTCAATTTCAGTAAATAATGGCATTACAAT
1672391
1672392
GTAATAACGACAAGAAACTAAAAC
AACATCAGACTTTTGCACTTTTATTAGAAGGCTTTGGA
1672453
1672454
GTAATAACGACAAGAAACTAAAAC
GATACATTGCATATATTGGCAATCAGCAATACAA
1672511
1672512
GTAATAACGACAAGAAACTAAAAC
ACTATATATTGTTTGGAGCTTATCATAAACTTCATC
1672571
1672572
GTAATAACGACAAGAAACTAAAAC
CTGAATAGAGAGATGATAGAAGAAACGGTAAGTA
1672629
1672630
GTAATAACGACAAGAAACTAAAAC
TCAGCCTCTAATTCTGCTGCAACTTCCATCAATTTCCTT
1672692
1672693
GTAATAACGACAAGAAACTAAAAC
ATTAATTCCAAAGGACATTGAGAAGAAATTTGGCTTAAA
1672755
1672756
GTAATAACGACAAGAAACTAAAAC
ATATGAGCAACAGCAACTCAAATCTTTATATGAAGTC
1672816
1672817
GTAATAACGACAAGAAACTAAAAC
CACCAAAGAGTTTTTGTCCAAAGCCTTTTATGGA
1672874
1672875
GTAATAACGACAAGAAACTAAAAC
CAGTCTCAATGTCTTTATGAGACAATTCTATATCCAA
1672935
1672936
GTAATAACGACAAGAAACTAAAAC
GCACTTCTACTTGCTTAACGCTATAGCAAGCAAGAA
1672995
1672996
GTAATAACGACAAGAAACTAAAAC
GTTCATCAACCTCATGCTGAGTAAGACTATTAGTATGT
1673057
1673058
GTAATAACGACAAGAAACTAAAAC
CTCGTATTCGTAAAAGCCCTCGTGGGTGGTGACGAT
1673117
1673118
GTAATAACGACAAGAAACTAAAAA
CTTTACAACTAATTTTTTCAGGAAAACAAATTGAA
1673176
1673177
GTAATAACGACAAGAAACTAAAAC
TATGTCTTAGATAGTTGAAAAAGCTAAAGCTTTT
1673234
1673235
GTAATAACGACAAGAAACTAAAAC
GAATGTGTCCCCCTAGAGGTTTTCACCAAACAACCA
1673294
1673295
GTAATAACGACAAGAAACTAAAAC
AAAAAACCTTTAACCTCTATCGAATGCTGTCAAAAA
1673354
1673355
GTAATAACGACAAGAAACTAAAAC
AACGTTACGACCACTACTACTCAGAAGAAGATAGT
1673413
1673414
GTAATAACGACAAGAAACTAAAAC
GAGGGATGAAGGCAAATCAGTATCAGCAATAGTAGAG
1673474
1673475
GTAATAACGACAAGAAACTAAAAC
GAAGTAGAACAGCTGTTTTTCAGGATTGAAATTAT
1673533
1673534
GTAATAACGACAAGAAACTAAAAC
AAGAGAATACTTTCTCGCCTCAGCAAGAATCGTATCAAT
1673596
1673597
GTAATAACGACAAGAAACTAAAAC
GTATGTGGGAGAGCTTTATGAGTGGTAAGACACAC
1673655
1673656
GTAATAACGACAAGAAACTAAAAC
ATGCAGGTACTATACTGAGCCTGATGAACAGCA
1673712
1673713
GTAATAACGACAAGAAACTAAAAC
AAATTTAAGGAAAATGGAGTGTATGTATATAAAT
1673770
1673771
GTAATAACGACAAGAAACTAAAAC
CTCAATTATTTTCAATGCTTTTTCTTTTTCGTTGT
1673829
1673830
GTAATAACGACAAGAAACTAAAAC
ACATCAGCACTTATGGATACTACGCCATGCTCATCT
1673889
1673890
GTAATAACGACAAGAAACTAAAAC
ACTATTACTTTTGAAAATATGTAGATAAGACTGGT
1673948
1673949
GTAATAACGACAAGAAACTAAAAC
TTACAGTTGTTCCGTTAGGAAGTATATAGTTACT
1674006
1674007
GTAATAACGACAAGAAACTAAAAC
AAAATAATCATAAAACCCGAGCATTACGAAGAATTGA
1674067
1674068
GTAATAATGACAAGAAACTAAAAC
TGTAAAGGACTTCTTAAAAAGGTTAGAGGGGTTTCTC
1674128
1674129
GTAATAATGACAAGAAACTAAAAC
GTAATTATTCTGATGGGTGCTATAATCTCGATGGC
1674187
1674188
GTAATAACGACAAGAAACTAAAAC
AGCGATTAGTTTAGTCGAATTAGCTATTGCGACTT
1674246
1674247
GTAATAACGACGAGAAACTAAAAC
ATGGGATCCTGATAATTCGGCATCAGCACAATTC
1674304
1674305
GTAATAACGACAAGAAACTAAAAC
CTCTTCATTTGTCTCGTGAAATATAGGGTTTTTCA
1674363
1674364
GTAATAACGACGAGAAACTAAAAC
ATAGGGTAGTTCACAAAGAGCCAGCCCTCGTCAAC
1674422
1674423
GTAATAACGACAAGAAACTAAAAC
CTTTACGTAGTAGTTATAGAGCTTCGTTACGTGCT
1674481
1674482
GTAATAACGACAAGAAACTAAAAC
CTTGAACCATTGAACCTGCGATTGCAGGGATTAAGTAT
1674543
1674544
GTAATAACGACAAGAAACTAAAAC
GCTGACTGGGGGTGAGCCAGAAATGAAGACTGGAAG
1674603
1674604
GTAATAACGACAAGAAACTAAAAC
TAAAATTAGTCTGCTGGCCAATTAAGAACAAACTCT
1674663
1674664
GTAATAACGACAAGAAACTAAAAC
GTGCAACAGGGTGAAACATAGATGAGCACATTTTT
1674722
1674723
GTAATAACGACAAGAAACTAAAAC
ATTATGCTCATTATCTCTGATTTCGACCTTAAAGC
1674781
1674782
GTAATAACGACAAGAAACTAAAAC
CTACATTGTCCTGAAGTCCTAACTTCTTTAATTCCTT
1674842
1674843
GTAATAACGACAAGAAACTAAAAC
TTTTTATTTTCAGTAGCTATCACCATAGTAGCCCTAAAA
1674905
1674906
GTAATAACGACAAGAAACTAAAAC
TACTCCCCAGGCTTACCCAGCAAGAAGAGGAAGCCTT
1674966
1674967
GTAATAACGACAAGAAACTAAAAC
TAGGAGGAAAATATAGGAATATAAAGATAGTACTA
1675025
1675026
GTAATAACGACAAGAAACTAAAAC
TAGGAGGAAAATATAGGAATATAAAGATAGTACTA
1675084
1675085
GTAATAACGACAAGAAACTAAAAC
TAGGAGGAAAATATAGGAATATAAAGATAGTACTA
1675143
1675144
GTAATAACGACAAGAAACTAAAAC
TAGGAGGAAAATATAGGAATATAAAGATAGTACTA
1675202
1675203
GTAATAACGACAAGAAACTAAAAC
TAGGAGGAAAATATAGGAATATAAAGATAGTACTA
1675261
1675262
GTAATAACGACAAGAAACTAAAAC
CATTTTAGCTCAAGCATCACCAGCATCAATTGAAAG
1675321
1675322
GTAATAACGACAAGAAACTAAAAC
ACCGTTCCGTAGATATTATTACTGTAACTCCCTCCC
1675381
1675382
GTAATAACGACAAGAAACTAAAAC
ACTGGGCTCCCCGTGATCACTCCAGGTCCTTATGTTG
1675442
1675443
GTAATAACGACAAGAAACTAAAAC
GACGCTAAAAAGCAAGAACAACAATCACAACAATCG
1675502
1675503
GTAATAACGACAAGAAACTAAAAC
TTTCTTAGTGAATCCCATGTACGTATATCTAATTTA
1675562
1675563
GTAATAACGACAAGAAACTAAAAC
1675586
Left flanking sequence : Till position 1670962 (length
bp)
AACTCCCTTCCGCACCCCAGGGAACAAAATTGACAATGAAGGAGAGAAAATATTTATAAACCAGGAAATA
AGAATGTAAAATTGATGAAGCCAACGATCA
Right flanking sequence : From position 1675586 (length
bp)
ACTGTAACTATTTAAAATAGAATGATGAGAGAATGACAAAGCCTTGCCGTTTATGGCGAGGTAAAGGTTT
CTACTTACGAGAGAAAAGTTGTTATTAAGA
Print the CRISPR sequence : From position
bp To position
bp