Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007355_4                                                                                                                 top


Strain : Methanosarcina barkeri str. fusaro RefSeq :NC_007355 (chromosome 1 )
CRISPR id : NC_007355_4
DR consensus (36 bp) : GTCGAGAGGTAGCTTCCACTAAAATAAGGATTGAAANumber of repetitions :4
Begin Position : 366521 End Position : 366772

366521GTCGAGAGGTAGCTTCCACTAAAATAAGGATTGAAACTTTGCATTTCCTCCTTTTCGAAGAAATTTTTCCTGA 366593
366594GTCGAGAGGTAGCTTCCACTAAAATAAGGATTGAAATCAAGATAATATCTGTTCATTTCTTCCTCCTAATAACC 366667
366668ATTCGCGAGCAAGATCCACTAAAATAAGGATTGAAACTCGATAGGGTTGAGACAGATGAAAATTGAGAG 366736
366737ATTCGCGAGCAAGATCCACTAAAAAAAGGATTGAAA366772
Left flanking sequence : Till position 366521 (length bp)
CGCTTAATATGGCCGCTTAATGTAGTCGCTTAATACTGTTTTTCAGAGTTGAAGTTACCTGAGGATTTGC
TGTAAATAAGGGAAAACGACCCTGTAGACT
Right flanking sequence : From position 366772 (length bp)
CAGGGATGTTTTGAGTTTTGTGGGGTGTCTGGAAAAATGATACATATGTTGATATTCTGTTATAACATAT
TATAATATATGTCTACTATAGCCATTGATC
Print the CRISPR sequence : From position bp To position bp