CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_007705_1
Flanking alignement tool
Page manual
  
Home Page
NC_007705_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae MAFF 311018
RefSeq :
NC_007705 (chromosome circular)
CRISPR id :
NC_007705_1
DR consensus (31 bp) :
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
Number of repetitions :
49
Begin Position :
857969
End Position :
861149
857969
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG
858033
858034
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC
858100
858101
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCGGACAACATTGTGGGTCTTCCGGGATGCGGT
858165
858166
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCAATCTGCTCGCCGTTGAACACCGTCGCAAA
858231
858232
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGCACCGACAGCGCCCTGATTGAGTATGTGCAG
858296
858297
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT
858363
858364
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTTCACGGGCCGTGGATACGTTACTACCCAT
858427
858428
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCCGGCCTGGTGGTCTTTGACATGCTGGACAACGT
858494
858495
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTGCAGGAGTTCATTTACAAATACCGCAAGGA
858559
858560
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGACACAGCCCTCACCGTTGTAAGGACACTTG
858623
858624
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTCACAATGCTGTGCCGTTTGGGCTTAAGACCAA
858689
858690
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTAAGACGGGTTGGGTACTGCTCAAGCATCTGATTG
858757
858758
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCTGCAAAGACCATGCGGTCAAGTCCTGCTGG
858822
858823
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTGCGTCTGATATCAGCCTTGGCAATTTGTTGGTC
858889
858890
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCAATAAAATGACTGATATTACCGCTAAGCTG
858954
858955
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTGAGGGATCATCTGCGAGACCTCACTGGCAACC
859020
859021
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATGCATACATACTGGCACAGGCAGGCACCCAT
859084
859085
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACTGTTGAGCAGGCAATATTGCTGACTGTGGGT
859149
859150
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCTCGGGATTTGGTGACATGCTAGTTTTCAAC
859214
859215
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCGTTTGGAGCTGCTGTGTTGCAGACGCCTG
859278
859279
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTCGAAGTCGCTTGCTGAGAGGCTGGAGGCCGC
859343
859344
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACCCTACACCGAGAGCAGCTGACACGCCATTGTC
859408
859409
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATATTACGACACACAGTGCAGATACAGCCACACAA
859474
859475
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCAAAATAAAAGCCTGAAATGCAGGTATGTCAAT
859540
859541
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGTGGTATAACCTAACATAACCCTGAGGAGTAA
859605
859606
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTTCGGAGTTTTGAGCTTCCCTTCTCCTGGCA
859670
859671
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGTCGCAACAGACGGATTAGCAGCAGTGATTGCTG
859736
859737
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCAACCCTCCCCACATTAATGCCAGGAGTTAACAG
859802
859803
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACTGCCTCATCAACACAAGATCCCCGTCTACCGGA
859869
859870
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTAGCGGCCTTGTCGACCTCAGTCACCAGCGATT
859935
859936
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGCGCAGCAGGAGCAGCCCCGGCAAATCGACCCA
860001
860002
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCATCATTAAGATCATCACGGCCAATAACGGAGA
860067
860068
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGCATAACACGGTAACTCAGTTCGCCAGGGATCC
860133
860134
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGAAGAAGACAGACACCACTCACGTCATCGCGC
860198
860199
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCAACGCCTCTTACCTTGTCCACAACATTCCA
860263
860264
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATCCGTGGCGCATGCAGGCCGTGCCGGTAGCACCA
860329
860330
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TAATTGTCTGTCCAGTTCGTGGTTGTACCATCGT
860394
860395
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGGCTGTATGCCCATCCAGCTGTGCCTCCAGGGC
860460
860461
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGCGCCATACAACATGCACGCCGGCGAACATCCG
860526
860527
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGTCTTGCAAGGTAGCCCTCCCATCTGCTTAGGTT
860592
860593
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTTGGAGAGTCAATGCAAGGATGCTGGCTGCACTG
860658
860659
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TATTTGCCAACACACCAACACACGGGAGTATTGTAT
860725
860726
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTGCAGCTGACCTTTAGTAGCACAACTACTAA
860790
860791
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCACCCACGGCCCAAGGATAGGCTCTACCTAGTAC
860856
860857
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCAACAAGCCCCAGGACTGAGTTGCAGCCCCTGTG
860922
860923
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AACGGAGAACTTCCTCCCTGCTCAAGCCATAGGTTT
860989
860990
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATCGACATGCGCGCACGGATCTTGCGTATGTC
861053
861054
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTAGACGGGGCAGTTAATCACAGGCACAGGGCGA
861118
861119
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
861149
Left flanking sequence : Till position 857969 (length
bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 861149 (length
bp)
GCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA
Print the CRISPR sequence : From position
bp To position
bp