Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007907_3                                                                                                                 top


Strain : Desulfitobacterium hafniense Y51 RefSeq :NC_007907 (chromosome circular)
CRISPR id : NC_007907_3
DR consensus (30 bp) : GTTTCAATCCCTCATAGGTAAGCTAACAACNumber of repetitions :21
Begin Position : 3142336 End Position : 3143687

3142336ATTTCAATTCCTTATAGGTAAGCTAACAACATTAGGGCGATTACAAGAAGAGGGTCACATTTTTTA 3142401
3142402GTTTCAATTCCTCATAGGTAAACTAACAACTGAATTGCAGGCTAATGTAAAATTACTCGAATCAT 3142466
3142467GTTTCAATCTCTCATAGGTAAGCTAACAACGATAGTTCGCGGAGGGCTTCGGCGTAGGTTTGGG 3142530
3142531GTTTCAATCCCTCATAGGTAAGCTAACAACGATCTGTTCATCGGCCAGTAGAACAGTAGTTTCGAG 3142596
3142597GTTTCAATCCCTCATAGGTAAGCTAACAACTATACCCGGGCAGGCCATACGGCGTTTCTGGGGTCAAT 3142664
3142665GTTTCAATCCCTCATAGGTAAGCTAACAACTTTCCCAATCACCCGTAAACACTCCGATTACAAAAT 3142730
3142731GTTTCAATCCCTCATAGGTAAGCTAACAACTGATCGATGCCAATGGGTATTTACTGCCTTGGTATA 3142796
3142797GTTTCAATCCCTCATAGGTAAGCTAACAACGAAATTTGCTGCACTGTACTTAGGAGGTGATAAAT 3142861
3142862GTTTCAATCCCTCATAGGTAAGCTAACAACTGATATGGTCCCATTCTGGTTATCGTCGATTACGGAG 3142928
3142929GTTTCAATCCCTCATAGGTAAGCTAACAACTCAGGGCTTCCGCACTCATTTTAGCCACCCCTGCAT 3142994
3142995GTTTCAATCCCTCATAGGTAAGCTAACAACCAATTGCGGGAAGTTCCCATGTCGTTATCATTTCGCC 3143061
3143062GTTTCAATCCCTCATAGGTAAGCTAACAACGAATTCCTTTTGCTCAGGTTGATTAAGTATTTCCT 3143126
3143127GTTTCAATCCCTCATAGGTAAGCTAACAACTAAGGAGGGCTTTGCCGATGTTGATGGTGTTTATTGA 3143193
3143194GTTTCAATCCCTCATAGGTAAGCTAACAACTAGGAGGTGCATTGATTTGCACAAGGAAGAATTTGCATT 3143262
3143263GTTTCAATCCCTCATAGGTAAGCTAACAACATGCGGGAGAATAGGGGAGTTGTGTTGGAATGAAAA 3143328
3143329GTTTCAATCCCTCATAGGTAAGCTAACAACCGACAATGCAGTGTTGCAGGAACTGGCAGTTGC 3143391
3143392GTTTCAATCCCTCATAGGTAAGCTAACAACACATCCACGACATCAAGCAAGGCGCCTACTTCAAC 3143456
3143457GTTTCAATCCCTCATAGGTAAGCTAACAACTGTTATGATGAGTAAAAAATGTCGGAGTATTTATT 3143521
3143522GTTTCAATCCCTCATAGGTAAGCTAACAACCCGGAGAAAAGCTTCTTTTCGCCACTGACACCTACTATCT 3143591
3143592GTTTCAATCCCTCATAGGTAAGCTAACAACGGAATGGAGATTTGGTAAGGAGTAGATAGTAATGAG 3143657
3143658GTTTCAATCCCTCATAGGTAAGCTAACAAC3143687
Left flanking sequence : Till position 3142336 (length bp)
ATATTCTTTAAACTCTGCTCACAGGCCTTAAGGGAATTATCAAGGGTCTTGAAACTTTTTTCAAGATAAC
GAACATCAAACAAAGCCCTACCAAGTTCAT
Right flanking sequence : From position 3143687 (length bp)
CCATTTCGCCCGCATTAAATAAGCCATTACAGCCATTGATCAAGATTAACCAAATCAGCCATTTTCTTTT
TAGTCCGCTTACCAAGCCCCATTCTTTGTC
Print the CRISPR sequence : From position bp To position bp