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CRISPRs details
NC_008148_5
Flanking alignement tool
Page manual
  
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NC_008148_5                                                                                                                 
top
Strain :
Rubrobacter xylanophilus DSM 9941
RefSeq :
NC_008148 (chromosome circular)
CRISPR id :
NC_008148_5
DR consensus (30 bp) :
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
Number of repetitions :
32
Begin Position :
2300783
End Position :
2302885
2300783
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
TAGGGCGAGCCGTAGTCTTCCCGGTACTGCTCCTCGGC
2300850
2300851
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CATCATCACCGGTCACGTCGGGAGCCTGGGCGGCCTG
2300917
2300918
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GCGGCCGCAGAGGAAGAAGGAGGAGGAAGAGGACTT
2300983
2300984
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGACGCCGCGGTGCGGATGGGCGGCGGAGTACGTGTTGT
2301052
2301053
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CGCGAAGCTCGCGGGCAAGAACCCGCTGGTAGATAGGG
2301120
2301121
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGCGCAATTTCGAGGATATCTTCGGGCGTGCGCCTTC
2301187
2301188
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GTGAGAGCTCCCCCCAATGGAGGCCGCTCTCATGCCT
2301254
2301255
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GTAGTGATCGAGGGCTACCTTGGCCGCGAGAACCC
2301319
2301320
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
ACATCCCCGGCTACCGCTTCTCCGCTGACTCGCGCCA
2301386
2301387
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGGCCGAGCCTGCCGGATGCTCGCAAAACGCCGGTA
2301452
2301453
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CCACGTGGGCGACTACCAGCTGGCTTCAAAGCCATGGAA
2301521
2301522
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GCTCCCGGATAGATATGCTGAGGAGGGGGGAGTTGGA
2301588
2301589
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CCTCATGGGCGGCCTCCAGCTGCGGGATCCGCCCTAC
2301655
2301656
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GACAAACTGGTAGTCCACCCTCTGGGAGTCTATCCAC
2301722
2301723
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGGCTAGCCCCTCCTCGCCCGCCCGCAGGAGGACGG
2301788
2301789
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGACTTTGTGGTGTCCCACCATGACCCGGTGGAGGT
2301854
2301855
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GAGGCCCCCCTTCCGGGGGGCCGGTCCCCCAGGATCG
2301921
2301922
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GAGGAGGCGCGCAGGCAGCTGGAAGAGGGCAGCAAGG
2301988
2301989
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CCTCCAGTCTGCGAAGACGACTGGAGGCTCGAACGCA
2302055
2302056
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGGCCGCCTCGTCATCAGTCCCCGGAATGCCAATTAT
2302122
2302123
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
TGCCACCCCGCGGGAGAAGCGCTCCAGCTCCTCCGAG
2302189
2302190
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
AGTCTGGGGCGTGGACGTACAGGGCGGGCCTTGCGG
2302255
2302256
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CCGGGAGCTCGTCCGGGAGCTTGCCGCCAGGCGCTA
2302321
2302322
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
TCTCGAGGGCGGACCGGAGAGGGAAGTGAGAAAGAG
2302387
2302388
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGGCGGTGGGGCTCCTGTAGCCCCACCACCCTGAAG
2302453
2302454
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GGAGGCTCCCTCGCCGGAGGAGGTCTGGAGCCTCCT
2302519
2302520
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
TAGGGTTCGAAGCGTACCCTACTTGTTGCATGGCATG
2302586
2302587
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
ATATGGACGCCGTCGTCGTTGGGATTTGGGTCTACGGGT
2302655
2302656
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
GAAGCTTATGCCGCCGTAGGACGCCCCGCTCTTTCG
2302721
2302722
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
CTCCGGGTCGGACCAGGCGTAGGAGCGCATCAGCGCG
2302788
2302789
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
TTTTTCCACAGGGGCATAATCTCCTCAGCATCGAGTA
2302855
2302856
GTTTCAATCCCTTATAGGTAGGCTCAAAAC
2302885
Left flanking sequence : Till position 2300783 (length
bp)
CTTCAGACACCAACCATCTTGGAGGATGATGGCCCCTCTTTTCTAGCGGGCCACCAATTTACAGAAGTTT
ATGGACGCAACCGTTGAAAACTGGAAATTT
Right flanking sequence : From position 2302885 (length
bp)
CAACCTCGAATATCCCCTTTTGCAGCTAATTCTTCTGAGATCCCTCCCTTCGCAAAGCGGCTCTCACTCG
AAGCCATTATAGAGCAAAGCGCTTTGTAAA
Print the CRISPR sequence : From position
bp To position
bp