Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008150_3                                                                                                                 top


Strain : Yersinia pestis Antiqua RefSeq :NC_008150 (chromosome circular)
CRISPR id : NC_008150_3
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :4
Begin Position : 985580 End Position : 985787

985580GTTCACTGCCGCACAGGCAGCTTAGAAAATGTTCGACGATTTATTTTATTTGTATTTCAG 985639
985640GTTCACTGCCGCACAGGCAGCTTAGAAAATTTATTAAAGATGCTGACAAAAAGAACTTAA 985699
985700GTTCACTGCCGCACAGGCAGCTTAGAAAGTCAACGCTTCACTCCCTGCGCGGGGTATAAC 985759
985760GTTCACTGCCGCACAGGCAGCCCAATAA985787
Left flanking sequence : Till position 985580 (length bp)
TTGATTTTTATGCTACTCAGGTATTTCACTAAAAAAAGGGTTTTTACGCATTTTGCGCCATTGCTCATTG
ATAAACATCGGGTTATCCGTATTATCTTAC
Right flanking sequence : From position 985787 (length bp)
TCTCAGCTCTCTGGCGGCGTTTTATCTGCAAATATTAACTCACTAATCCCTTGGCATATTCAAACAACGC
TTTTAGCAGCGCAAGTTTCTCTTTATCGTC
Print the CRISPR sequence : From position bp To position bp