Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008601_4                                                                                                                 top


Strain : Francisella tularensis subsp. novicida U112 RefSeq :NC_008601 (chromosome circular)
CRISPR id : NC_008601_4
DR consensus (36 bp) : ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACNumber of repetitions :10
Begin Position : 1470758 End Position : 1471379

1470758AATAATATACAGACAAATTATTTAAAGTTCTTAGACTTCAAGGTTCAATGCAAGCAATCAAACAA 1470822
1470823ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACGTCCATTTATTTCCGTCTCTCTTGCCTTTTGA 1470890
1470891ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACAAAAAACTTTATATCATAAATGAAAGTTT 1470955
1470956ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACTTGTTATCAGTAAGCGTATCTACTAGGTA 1471020
1471021ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACCTCAACAAGATAGAATTACCTTTTAATCT 1471085
1471086ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACAAAAAAATGACCTTCATAAATCGCTA 1471147
1471148ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACCGGCTACTAATACAAAAGGCTCTAGAC 1471210
1471211ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACTGAATTATCTGAAGGCACAGGAATAGTAGC 1471276
1471277ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACTTTTAACAGTGGCCTTATTAAATGACTTCTC 1471343
1471344ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC1471379
Left flanking sequence : Till position 1470758 (length bp)
GAAGCTTTACTAGCATTATCTTTCATCTGCATTAAATCCATTTTTATAAGCCTATAAATTCTCAAGTAGT
GATATATTAGAAAATTCTAATTTAGAAATC
Right flanking sequence : From position 1471379 (length bp)
CCGTTTTTGCCTAAATCAGCAAAAAAAGACCTAAAATCTATGATTTTTTTAGCATTTTGATATATAACAA
CAGTCATATTTTTAAATATCTCTAAGAACT
Print the CRISPR sequence : From position bp To position bp