Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008639_3                                                                                                                 top


Strain : Chlorobium phaeobacteroides DSM 266 RefSeq :NC_008639 (chromosome circular)
CRISPR id : NC_008639_3
DR consensus (32 bp) : GTTTCAATCCACGCGCCCGCAGGGGGCGCGACNumber of repetitions :115
Begin Position : 1625359 End Position : 1633049

1625359GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAGGCTATCCGTATCTGCGCTTTCACGTCTGTAAGCT 1625426
1625427GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTGTCATTGATGGCCGATGATTTCCGTGAAATAG 1625492
1625493GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAGGCCAAATCGACCACATCGACGGCGACGGTCT 1625558
1625559GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGATGTCGCGTTCCGGCACGACGCGCTCAAAAA 1625624
1625625GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTGCATCCACGGCAGTTCAGGGGAGGGATTCGGTTAT 1625693
1625694GTTTCAATCCACGCTCCCGCAGGGGGCGCGACGGTGTCACTTACGGTTGTGTTTTTTGATCGGAATCGATTCAATCCACGCCGCCCGCCAGGGGGCGCTACCATTGAATACTACAAAGATGGAACCTCAACTACTC 1625829
1625830GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATGCTTGCCATTACCCTGATCGCAAGCCACCCAA 1625896
1625897GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAAAGGTGATTGTGATCACACACCTGCCAAGCAT 1625962
1625963GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCGGATTGTACTCTCTTGCCAAGTGGGTGATCGGCA 1626030
1626031GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAGTTGTCCAGGCCTTGCACGACCTCAATCAACGG 1626096
1626097GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTCGTGATCAAGGGTATGCAGGTGAGCGTAGACATC 1626164
1626165GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGAAGCTCAGCGATGCGGAAACCGTAATCAACGAG 1626230
1626231GTTTCAATCCACGCGCCCGCAGGGGGCGCGACACTTGATTTTCATTGGTCTTATGCCGGGCAAAAC 1626296
1626297GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTTTTTATCCTTTGTCCGGAGCTTCATCGGTGTCA 1626363
1626364GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTCAACAGCATCGCCCTGCTTGAAACCACCGAGCG 1626430
1626431GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTCCTTGGTGCGGCGGACGCAGATGAACTGCTCA 1626496
1626497GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAACACCCGATGGCTTATAGGCCTGTTTTTCAGC 1626561
1626562GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAGATATGTTTTATGCGGTATGGGACGGGTATATA 1626628
1626629GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTTAATGCTCCCGATGGAGTACGATCCAAAAAG 1626693
1626694GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGGACTGATGAAAAAGCACGTCTTAACATACCT 1626758
1626759GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATACTGAGCCTGTAGGGTTTTATCATCCTGTTTGA 1626825
1626826GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAAGGTAAGCCAGATAAGCCAGATCAGAACCGA 1626890
1626891GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAATCAAGATAGAGTATTATGAGTACCTTTACGC 1626956
1626957GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTTCTTTCCATATTGCATGACGTGTCCAGTACTCG 1627023
1627024GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACTTGGCCGCAAGCTTGAGAATATCGCAGTTGTA 1627090
1627091GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTAACATAAATGTCAATTTTCGGACAACCAGTTTGT 1627158
1627159GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTTATCAACACCAATGTTTTTAATGTAGTTGCGT 1627224
1627225GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATTCGGCAAGCATTTCAGGTACAGCGCATGTATGAA 1627292
1627293GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATTATCGTAATCCATTGTTGACAGCAAAGTGTT 1627358
1627359GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCCGATCTTATCGGATCGTTTGCCACTTTGACAGC 1627424
1627425GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATGGAATAGGTGCAAACAAAATGACACTTGGAAACG 1627492
1627493GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGTAAAGGAGATGTGCGACGCCATAAAATGGGCAA 1627559
1627560GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAGCACAAGACGCTGCTCGGGTGTATGCTGCAG 1627624
1627625GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTATTGATGTCGGGTTTTGGCACGACGAGTACACT 1627690
1627691GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTACTGTTGTAATAGTGGCAGTGGTAATTTTTAT 1627756
1627757GTTTCAATCCACGCGCCCGCAGGGGGCGCGACACACAATTGTGGGCGCCCGCCAAAAAACGATATA 1627822
1627823GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAAGGCTCCGGTTGACAACCGCGCTGCTTAACG 1627887
1627888GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGATTCCATACCGACTGGTGAAATCACTGGTATG 1627952
1627953GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAAAAGCGACATAGAAGAGCGCATTTATGGAGAC 1628018
1628019GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCACTTGATCCAGAGCATGCAGCGCGAGTTGCC 1628083
1628084GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGTATACTCAGATAAGGCCGTCAGAAAGCCTAAA 1628149
1628150GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGGCACCACATAGTACCTGCAGGAGACATGCGC 1628215
1628216GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAAAACAGATCAAGTGGGCAACTGACATCAAAGCC 1628282
1628283GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGATTTTAACCTGGATTTCGACACCGCATTTCTCGAA 1628350
1628351GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTGCTTTTGCGTATTTTTCTGCCGCCCAACGGT 1628415
1628416GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTTTTGTCATTGCGGTTTGGTGTTGCGCACGCAA 1628481
1628482GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTACCGCAGGTCAGACTGTCACGATTGGCCTTGCAGT 1628549
1628550GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTAATTAGTGGATGAGACAATGACAACAAAACA 1628614
1628615GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGCCTTCAATATCAGGGTTCACGCCCTGTATCGC 1628680
1628681GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATTTCCCCCTTGATAATCTCGCTCATCTGCCCGA 1628746
1628747GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTATGAGCGTTTACGACATTAAAGCCGGAGGATGGA 1628813
1628814GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGATTACCGCCATGTCGCTGACGTACCTCACCCT 1628878
1628879GTTTCAATCCACGCGCCTGCAGGGGGCGCGACCTTAACCATGAGGACGACGCTCTTGAGGGTATGGAA 1628946
1628947GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGAATTTCAATGCTCCTGGATAAGATGTAAGAGTA 1629014
1629015GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATTGATCAAGAAGTGAAGCGCAAAAAGATAGACGT 1629082
1629083GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTAATACTGGTATATTCGATGAGGCTGGTGAATACCT 1629150
1629151GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATGAGAATCTACCATCTGATCAAAGTCTACATCTC 1629217
1629218GTTTCAATCCACGCGCCCGCAGGGGGCGCGACACAATTCTGCAGCAAAAGAAGCTCAAGCAAACAGA 1629284
1629285GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCCATATATCCAAAGGCTGCGGGTTTGTTGAGC 1629349
1629350GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTAGCCGGGAGCGATGATAATCTTGGCCGTGTAGCC 1629417
1629418GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACTCCGCGCAACTGTCCCGGCCTTGTCGGCCT 1629482
1629483GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCGGCATCAGCTCTGTCGAGTACACCATTGCCTC 1629548
1629549GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTCGTTCACATCCTCGAGGATTGGCAGGACTGGAC 1629615
1629616GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGACGATTACGCTATCCACCAGCTTCGAGAGCG 1629680
1629681GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACCGAACATTACAAAGATGGAACCTCCACAACTC 1629747
1629748GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAACCAACCAGACTGGGCAGACGTCCAGATGGTAA 1629813
1629814GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGACCTTTGGGATATGGGTTCACGATGGGCGACAATAT 1629882
1629883GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAGCCGGGGTATAGAGCTTTCAAGCAGCTTGCCTTGA 1629951
1629952GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAACCGGGATGTGCAGTCCGTGCGAGATCAGCTTA 1630018
1630019GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTGATGCCGCACCGGTTCCCCTTCAAGTTCGACTG 1630085
1630086GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCCCTCATAAGAAGATGCCGGGACGCCTTTTGTCTC 1630152
1630153GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTTGGCTGGTGCAAGACGGAGGAAAGCTATGATAC 1630219
1630220GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGGGATCGATGCCGATACTCCGTCTGTCGTAATG 1630284
1630285GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTTATGTCGTTGATCGTGTATAGCCCGACGATAA 1630350
1630351GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCATGCAGACCACCTGCGCTGACGAGCAGGAAGCA 1630416
1630417GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGACGGCTTTACGGTAGATCGGGCAAATGATGCGGT 1630483
1630484GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCATGTGTCGAACAGATCACCATCGAAGAGAACCGT 1630551
1630552GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGGCAGAGGGCTGAGTTGCAAGAGCGCCTTGATGC 1630618
1630619GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGATAACAAAATTACCTGCAAGCACAAAAAAAAGCA 1630685
1630686GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAGAGGCGCCCCGGCGGAACGTGCTGAGTTTTACCA 1630752
1630753GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGGAGGACATCTTCATCAATTCTTCATCTGTGATT 1630818
1630819GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTCAAAAAAATTCATTAAAAAGTATTGTGATTGCAGG 1630887
1630888GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGGCCAATGCAGCCGGGAACCGTAACCCCGGATC 1630952
1630953GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATGGCAAAGCCTGAAAAAATATTCATGCGCTTTGA 1631019
1631020GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTTTGCCGAAGGTGCCACAAAATCAAGCATCGCGGG 1631087
1631088GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGCAAGGAAGTCTTCCAAATTCCCTTTGTGTCGA 1631154
1631155GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAGCTGATGAACGACGAGCTATCAATTAAAAAACA 1631221
1631222GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAGAAGAGCAAAGCTTGCCGTTAATCCATTGTGC 1631286
1631287GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATTACCCGAATGGCCAACCATCCGAGTATCGCGAA 1631353
1631354GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGGATCAATATGGTCAGATTCCAGGATTGCGGAAT 1631421
1631422GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATAGTGAATTTTGTGAAAATCACATATAGGAGAT 1631487
1631488GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTGGTACTTACTCCTTTTATGGGCGTAGGATCG 1631552
1631553GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTGCGGGAGCAGCTTGATGGCGGTGACGTTTTCGAC 1631619
1631620GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTTCTGTCGCCGGCGGCGCTCAGGTGCTGCAGAT 1631684
1631685GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGGATATTTGACTGACGTTAATGTGATCGATGGCGTT 1631752
1631753GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAAGCGGAGTCGAGGATATGACAATCTCAGCCATT 1631819
1631820GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAACTACGATCTTGGGGCGGAGGTTGTTCGGAGC 1631885
1631886GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCCGGATTCGACGTTTGTCGGGTAGCTTCCGGCGG 1631952
1631953GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCTCGCGGAGTTGTACATCTCGACCAACAAGGT 1632017
1632018GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTCATACCATTGTGTGTTGATATGATGCGCAGAGG 1632083
1632084GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAAGAAGGTTTATTATAAGCCTTTTGCGCCTCATGC 1632150
1632151GTTTCAATCCACGCGCCCGCAGGGGGCGCGACTAACTTTAGCATGGTACCATCTGTAAGTGTACCGA 1632217
1632218GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGAATTTGCGACAATGTCGCGAAACCCTGGAGTCG 1632284
1632285GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCCAACAATTGTTCCCGTTGCTGAATCAGTAACGGT 1632351
1632352GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGTTATCCGCAAAAACAAATTCGCAATCCTCAACA 1632417
1632418GTTTCAATCCACGCGCCCGCAGGGGGCGCGACATCTGCGCTTTTACATCAGCAAGCTGCACAGGAT 1632483
1632484GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCCCTCTATCTTTGATCGGTTTTGCTCAAGAGACG 1632549
1632550GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCTCACGACATCGGGGTGCGGGAACTGATGAGCGG 1632615
1632616GTTTCAATCCACGCGCCCGCAGGGGGCGCGACAGCCATACGGACACAGCCGCGCAACATTCCGTT 1632680
1632681GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGTTTCTCGATCAAGTGATCGGCGATATACGGCA 1632746
1632747GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCGATGGCGCAGGCCAAAACCGTTGAGGCTCAAGC 1632812
1632813GTTTCAATCCACGCGCCCGCAGGGGGCGCGACGCATGGTCGAGAAAGAGTTGCCTGAATCGGCACCTGT 1632881
1632882GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCAATGCTTCTGTTAAGTTGAGCAAGCGCAATCACTG 1632949
1632950GTTTCAATCCACGCGCCCGCAGGGGGCGCGACCACAGCCCGCCCTTATCAGCAGGCGTTGTTCGAGGC 1633017
1633018GTTTCAATCCACGCGCCCGCAGGGGGCGCGAC1633049
Left flanking sequence : Till position 1625359 (length bp)
GTGGCGCACTTTACTCCGGTACGGGTGGCACATATTGTTCCGGTATGACTGGTACACTATTCTCCGGTAG
AGGTGGCACACTATTCTCCGGTGTGCTCAA
Right flanking sequence : From position 1633049 (length bp)
TGTCAATCTATCGTGTCAGGTATTCCATGGCCTGCGGAGCATTATCCGCGAACCATTTCGTATGCCAAAT
AACAATTTACGCAAACCTGACAATGAAAAA
Print the CRISPR sequence : From position bp To position bp