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CRISPRs details
NC_008698_2
Flanking alignement tool
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NC_008698_2                                                                                                                 
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Strain :
Thermofilum pendens Hrk 5
RefSeq :
NC_008698 (chromosome circular)
CRISPR id :
NC_008698_2
DR consensus (24 bp) :
CTCTTAGTCTTGCTGATTTTGAAC
Number of repetitions :
14
Begin Position :
1227253
End Position :
1228098
1227253
CTCTTAGTCTTGCTGATTTTGAAC
AGGGTGGCTTGATGGTGTGATCCACAACCTTGC
1227309
1227310
CTCTTAGTCTTGCTGATTTTGAAC
TAAGGACGTCGAGACTATGGAGCCACTCGCCTGTAT
1227369
1227370
CTCTTAGTCTTGCTGATTTTGAAC
TTGCACGGGGCGACCACGCCGATACCCGGTATGGCGACCACGGTTATT
1227441
1227442
CTCTTAGTCTTGCTGATTTTGAAC
GCGACGCCGGGCGAGGCGATGTGGGCGCCGAAGGCGCT
1227503
1227504
CTCTTAGTCTTGCTGATTTTGAAC
CGAGCTGGAGAGGCTTGCGATAATCGGGGCAATAAGCGATTT
1227569
1227570
CTCTTAGTCTTGCTGATTTTGAAC
ATGTAGCAGGCTACTGCGGAGTCGCGTCCGCCGCTAA
1227630
1227631
CTCTTAGTCTTGCTGATTTTGAAC
TCGCGAGATCCAAGACACTCAGAACTTGGTTCAAGCTTAATA
1227696
1227697
CTCTTAGTCTTGCTGATTTTGAAC
GGTGACGGGAAGCACAGGGTCTTCGAGTTCGTGGGCTTG
1227759
1227760
CTCTTAGTCTTGCTGATTTTGAAC
GCGCATATGCGGGGGGACGGAACCGACTAAACGT
1227817
1227818
CTCTTAGTCTTGCTGATTTTGAAC
TTGAACGGAGCAGGCGGGGCGGGGTGAACCGGTAGGTTTTGGGCG
1227886
1227887
CTCTTAGTCTTGCTGATTTTGAAC
GGCCCTCCAGAGGGAGGGCATACTGCCGCCTTAGCCAAGCTCCCTA
1227956
1227957
CTCTTAGTCTTGCTGATTTTGAAC
TCTGGCATGGTTGCTAGGGTAAGATCCGTTC
1228011
1228012
CTCTTAGTCTTGCTGATTTTGAAC
TGAAGAACATAAACGAGGCTATACTAGGTACTAGCGCGC
1228074
1228075
CTCTTAGTCTTGCTGATTTTGAAC
1228098
Left flanking sequence : Till position 1227253 (length
bp)
ACCAACGCGAAACCAGCAAACACCCCCACCTCGTGTGTATATCGACACAAACCTCTGATTTTTGAACACA
TGGCGTTGCCAGCCCTACCATCGCGGTTCG
Right flanking sequence : From position 1228098 (length
bp)
TGAGGGGTTTGTGGGAGCCTTTTCCCGCAAATCCGGGTTTTATTTCTCTGTGGAGGTATAAAACGTTTTC
TGTTCCCTTCTTCCCATTGGGAACAAATCC
Print the CRISPR sequence : From position
bp To position
bp