Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009033_7                                                                                                                 top


Strain : Staphylothermus marinus F1 RefSeq :NC_009033 (chromosome circular)
CRISPR id : NC_009033_7
DR consensus (25 bp) : GTAACAACATAGAAAGAATTGAAAGNumber of repetitions :15
Begin Position : 564439 End Position : 565365

564439GTAACAACATAGAAAGAATTGAAAGGCAGAAATACAACAAACATGGTTTCACATATAGGGGATTG 564503
564504GTAACAACATAGAAAGAATTGAAAGTTTCTTTGCTAGTATAACAGCTTCGCTTAAATCACTCGGTG 564569
564570GTAACAACATAGAAAGAATTGAAAGTCATTCTTCCAAGCATAATATAATGCTGTCATGATAGTG 564633
564634GTAACAACATAGAAAGAATTGAAAGATAAGCATTGTTGCTTGCCGTAATTGTTACTGATACAG 564696
564697GTAACAACATAGAAAGAATTGAAAGTCATATAATCGTCTTTTTTCTGCTTTATTCATGTTAAT 564759
564760GTAACAACATAGAAAGAATTGAAAGATTGTTTCAAATGTTTCGCCTTGTTTCTCCAGTTTGCGGG 564824
564825GTAACAACATAGAAAGAATTGAAAGATACAAGACGACTATCCCAAAGAAAAATATAGATTGATTG 564889
564890GTAACAACATAGAAAGAATTGAAAGTGAAAGTATCTGTTCAAATATTTCTTAACAATTTCAACTA 564954
564955GTAACAACATAGAAAGAATTGAAAGTTAGTCCGAGCCATTTCTCCAAGATGTCTGGAAGAACAG 565018
565019GTAACAACATAGAAAGAATTGAAAGTATTATCAATTCTTGGAACAGGCATAATATCACTAGCAT 565082
565083GTAACAACATAGAAAGAATTGAAAGATTATTTATGCTCGGCATCAGGCTCAACAATAAAGTCTTA 565147
565148GTAACAACATAGAAAGAATTGAAAGCCGCTTTGTCTTCAAAACTCTCGCCTGGTCTTTGCCACT 565211
565212GTAACAACATAGAAAGAATTGAAAGTTTACTAGTTTAACTGTTACTGTTTTACTGGCATCTGCAT 565276
565277GTAACAACATAGAAAGAATTGAAAGTATTGTAATATGCAGTATCGCTACCCAGTAGAAGGCTTT 565340
565341GTAACAACACTAAAAGAATTGAAAG565365
Left flanking sequence : Till position 564439 (length bp)
AGAAAACTGGTCGAACATGATCAACCAAGAACAAAATATAGAAAGCAATATATACTGGTTCGAACAAAAA
AGATAAGTGTAACAACGTATTCGAACCAAA
Right flanking sequence : From position 565365 (length bp)
TAGTGTTCAGGGGGTGTTTTGAATCGTTTTATGAGGGCTTGTATATATGTGGAGTATGCTTGTTGGTGTG
GGGAGTGGTGGTGAAGGGTTCTCCTGGGAA
Print the CRISPR sequence : From position bp To position bp