Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009437_11                                                                                                                 top


Strain : Caldicellulosiruptor saccharolyticus DSM 8903 RefSeq :NC_009437 (chromosome circular)
CRISPR id : NC_009437_11
DR consensus (29 bp) : GTTTACATCCCTCATAGTTCAGATAAGACNumber of repetitions :102
Begin Position : 2513322 End Position : 2519967

2513322GTTTACATCCCTCATAGTTCAGATAAGACTAAAGTTATTAATCCTCTTTCAGCCCACTTGTCGTA 2513386
2513387GTTTACATCCCTCATAGTTCAGATAAGACTTGTTCCATTTCTTTGACAATCCGCTTGAATTCTTTTT 2513453
2513454GTTTACATCCCTCATAGTTCAGATAAGACGAAGGAGCTTATACAATACAGCGAGGATATCTTAGC 2513518
2513519GTTTACATCCCTCATAGTTCAGATAAGACCAAGGGCAAAGATTGCAATACCCAGACAGGGAAAGA 2513583
2513584GTTTACATCCCTCATAGTTCAGATAAGACGAACTGAAGAGTTCCCTTTTGTTTTTGATGAAGCAA 2513648
2513649GTTTACATCCCTCATAGTTCAGATAAGACTCTTGAATCTGAGATTGTGATAGTAACAAATCAGGA 2513713
2513714GTTTACATCCCTCATAGTTCAGATAAGACAAGTAATGATAAATGTTGTCTTTAAGCACCTTTAAC 2513778
2513779GTTTACATCCCTCATAGTTCAGATAAGACGAGATTGCAGAACTTAAAGCAATGATGACAAAGCAAA 2513844
2513845GTTTACATCCCTCATAGTTCAGATAAGACAGACGGAGGTTGTATCCTGTCCGTCGGATACCCTTC 2513909
2513910GTTTACATCCCTCATAGTTCAGATAAGACCAACGCCCTTCCTCACATGCCTTATAATATCTTTTA 2513974
2513975GTTTACATCCCTCATAGTTCAGATAAGACTTTGATTTGATGTTGAAATAGTTGAACATTTTTAAG 2514039
2514040GTTTACATCCCTCATAGTTCAGATAAGACTGCAGAGCAGCAACTAAGTTTTGATTTTCAAGAAAA 2514104
2514105GTTTACATCCCTCATAGTTCAGATAAGACCTGCTGCTGCTCCATCCTCGAATGTTGTAATTGCAA 2514169
2514170GTTTACATCCCTCATAGTTCAGATAAGACTTTCTTTGCTGACTAATAATTTGTATTTACTTGAAGT 2514235
2514236GTTTACATCCCTCATAGTTCAGATAAGACTATGCAGCCTCTTGCATAGCTGCATCCATCAACTT 2514299
2514300GTTTACATCCCTCATAGTTCAGATAAGACGAATTACAAACTCTATTGCTTTTGAAGGAACTTACGA 2514365
2514366GTTTACATCCCTCATAGTTCAGATAAGACTTCCATTTCTTTGACAATCCGCTTGAATCCTTTTT 2514429
2514430GTTTACATCCCTCATAGTTCAGATAAGACTTCAACAAGCATTTCAATAATTAATTCATTCACGGC 2514494
2514495GTTTACATCCCTCATAGTTCAGATAAGACTCGCTGTGTAATGCGTATCTCAAAGCATCCATGCAG 2514559
2514560GTTTACATCCCTCATAGTTCAGATAAGACGTAGATTGGATAATCAATGAAGGTGTGGAATATCCG 2514624
2514625GTTTACATCCCTCATAGTTCAGATAAGACCAAAACTGCAATTGACACACTTAATGACATTGCAAAAA 2514691
2514692GTTTACATCCCTCATAGTTCAGATAAGACCAGCAGTGAATAAATCTCCGCCTGCTCTTTATCATCCTG 2514759
2514760GTTTACATCCCTCATAGTTCAGATAAGACAGGTAAAGCTGTCTTCACCAAGATATTGCTCGATAAT 2514825
2514826GTTTACATCCCTCATAGTTCAGATAAGACTTGATGAGAAAGTGCATGTGGTTAGTACACTACCAGAG 2514892
2514893GTTTACATCCCTCATAGTTCAGATAAGACTAAGTTGCGAGGAACGTTCGTCTGCAGGGTATATGA 2514957
2514958GTTTACATCCCTCATAGTTCAGATAAGACCTGCTACCGAAATCGCCAAGTTTTGCTGTTGCAGCT 2515022
2515023GTTTACATCCCTCATAGTTCAGATAAGACACCAGAGTACATTGAGTTTATCAAGAAGACATACAC 2515087
2515088GTTTACATCCCTCATAGTTCAGATAAGACCTGGCTAAATTGAGCATGTTAGATAGCAATATCTAC 2515152
2515153GTTTACATCCCTCATAGTTCAGATAAGACCCTTCGGGCTGCGGAACGCTAAGCTTGCTTCTTGCCGA 2515219
2515220GTTTACATCCCTCATAGTTCAGATAAGACATCAGAGAACTACATATAGAGAAATCGACCTTTTAT 2515284
2515285GTTTACATCCCTCATAGTTCAGATAAGACGTGTGTTGGCATTGAAATGAACTGGGAAGATTACAGAA 2515351
2515352GTTTACATCCCTCATAGTTCAGATAAGACGAACGAAGAAAAAATTGAAATATCTTTCTTGCGTGA 2515416
2515417GTTTACATCCCTCATAGTTCAGATAAGACCCCAGCACCGGGCTGCCCAGAAAGCTAAGATGTGAGGG 2515483
2515484GTTTACATCCCTCATAGTTCAGATAAGACCCACTGCACCGTTTACTTGGGTATCGAACAATTTAAAT 2515550
2515551GTTTACATCCCTCATAGTTCAGATAAGACACTCCACATGACTATCATCCCACGAAACAAAACACG 2515615
2515616GTTTACATCCCTCATAGTTCAGATAAGACTGTGCCGTCTGGCATCGCATATACACATATAAGATCA 2515681
2515682GTTTACATCCCTCATAGTTCAGATAAGACGGATAGTAGTCACACAAGAGCTTGGGCGACAGTTTGAAC 2515749
2515750GTTTACATCCCTCATAGTTCAGATAAGACAAAAGTGAAGCTGTAGCGTTTTTGATGAAACATTTTA 2515815
2515816GTTTACATCCCTCATAGTTCAGATAAGACTTTGGAACATGATAAAGAGCATCATTACAACAACA 2515879
2515880GTTTACATCCCTCATAGTTCAGATAAGACCGATGATAACGTTCAGCAAGAAGCAGAAGGAGTTTGCA 2515946
2515947GTTTACATCCCTCATAGTTCAGATAAGACTGACCCAAGCAGAGTAACTACCCCCATTCATCTTAT 2516011
2516012GTTTACATCCCTCATAGTTCAGATAAGACATATTTCAATATGTCCTGTTCCGTCCAAAATCCCAG 2516076
2516077GTTTACATCCCTCATAGTTCAGATAAGACTGGTAATGCTGAAGAGTTTTTAAACAAATCACTCA 2516140
2516141GTTTACATCCCTCATAGTTCAGATAAGACGTATACAACGAGGACTGAAACATATTATAAAGAAGA 2516205
2516206GTTTACATCCCTCATAGTTCAGATAAGACCTATCCTGTGGAGTCGAGCTTTGGCTTGTTCGTAAT 2516270
2516271GTTTACATCCCTCATAGTTCAGATAAGACTTTCCTTGAGCTTTTGAAAGAGTTCTTTTTTGCTTTC 2516336
2516337GTTTACATCCCTCATAGTTCAGATAAGACCCATGATTTTCTTTGCTATCTCTTCTTTCTTTTGTA 2516401
2516402GTTTACATCCCTCATAGTTCAGATAAGACTTAGTGAATATTACCAAGCAATACTTATAACAAAGTA 2516467
2516468GTTTACATCCCTCATAGTTCAGATAAGACGTTAAGTGTTCAACAAATAATTTACAAAACGTTAGA 2516532
2516533GTTTACATCCCTCATAGTTCAGATAAGACCTTGCATTGATTTGAAAATACCCAGAAAAATCCAA 2516596
2516597GTTTACATCCCTCATAGTTCAGATAAGACTACTTTTGTAGCGTTAAAACTAACCATCAAGTTTT 2516660
2516661GTTTACATCCCTCATAGTTCAGATAAGACCAACCTTGAGATAGTTTTTCATCTCGCTAAGAGTTAC 2516726
2516727GTTTACATCCCTCATAGTTCAGATAAGACCAAATAGGGAACTCTGGGATACTCTTGCTACTTCAAT 2516792
2516793GTTTACATCCCTCATAGTTCAGATAAGACCTAAAGCTAAAAGCATTTGTGAATATTTAACCAAATCT 2516859
2516860GTTTACATCCCTCATAGTTCAGATAAGACTAATTTTGAACTGGCACAAAAGGTTAAGCACATTA 2516923
2516924GTTTACATCCCTCATAGTTCAGATAAGACCGGCACAGCGTATGTTGTCAAAGAGTATTATCACGA 2516988
2516989GTTTACATCCCTCATAGTTCAGATAAGACAATCCATAGTCAGCAAGCTGTGTTATTGTTCTTGTT 2517053
2517054GTTTACATCCCTCATAGTTCAGATAAGACAATCAGAGAACTACATATAGAGAAATCGACCTTTTAT 2517119
2517120GTTTACATCCCTCATAGTTCAGATAAGACCCAGCGGTATGTATCCAAGCACATCTTGGGTCTGTGGT 2517186
2517187GTTTACATCCCTCATAGTTCAGATAAGACAGCAAGATAAAATCTGAATAAATAATTACTACGATA 2517251
2517252GTTTACATCCCTCATAGTTCAGATAAGACATATGAGGCTTGTGGTTGATATCGCTAAGCGTTATAA 2517317
2517318GTTTACATCCCTCATAGTTCAGATAAGACCAATAGCTGGTTATCAATATACAGTTGGTGGTGTAA 2517382
2517383GTTTACATCCCTCATAGTTCAGATAAGACTTGCTCTTTTTTCTTTCTCTCTATCTCTTCAAGTTT 2517447
2517448GTTTACATCCCTCATAGTTCAGATAAGACTGATGCCAGCTAATATGATGCCGTTGGCAACAATGAA 2517513
2517514GTTTACATCCCTCATAGTTCAGATAAGACGCGCCGTGCTTGCTATTGTGTCCCAAGTGTTTTGC 2517577
2517578GTTTACATCCCTCATAGTTCAGATAAGACGGTCTGCTTTTATTCCGGCGTTGCCCAAGATAGCCA 2517642
2517643GTTTACATCCCTCATAGTTCAGATAAGACCGTCGGTAATCTGTATGCCTAGTTGCTTCAACATTT 2517707
2517708GTTTACATCCCTCATAGTTCAGATAAGACCGAGGCATTAGCCGCACTTGCCAGCACGTCCGCAATG 2517773
2517774GTTTACATCCCTCATAGTTCAGATAAGACTGGTTGTCCATTATCCTTGGTGCCAGTATCACCCAT 2517838
2517839GTTTACATCCCTCATAGTTCAGATAAGACCAGCATACCGGACATAGCCTCGGCGCCAAAAATCGTAG 2517905
2517906GTTTACATCCCTCATAGTTCAGATAAGACTAAAAGGAGTGATTACTTTGGATTTGAACTATGAAC 2517970
2517971GTTTACATCCCTCATAGTTCAGATAAGACACTATTGACAAGGTCAGAGAAATAGCGAATTACTTT 2518035
2518036GTTTACATCCCTCATAGTTCAGATAAGACTATGCCCCGATATAAAGGTGAGCCTACAAGTATG 2518098
2518099GTTTACATCCCTCATAGTTCAGATAAGACGCAGTTTACGGTAGGTATGGCGGGCTTCGAAGGCG 2518162
2518163GTTTACATCCCTCATAGTTCAGATAAGACCAACATATTCCCTACCGTTGTAAACAACCCTATCATC 2518228
2518229GTTTACATCCCTCATAGTTCAGATAAGACCATACCAGCAAGGTATTTGACAGGACAACTAATTTCA 2518294
2518295GTTTACATCCCTCATAGTTCAGATAAGACCTCTGAACTTGCGTTGTCGTCACCAGCTGGCTGCCCGC 2518361
2518362GTTTACATCCCTCATAGTTCAGATAAGACCTTGAAAGAGAATTAAACAAAACAATAGACTACAA 2518425
2518426GTTTACATCCCTCATAGTTCAGATAAGACGATAAAGGCAATGAATGCAATGCTTGGTGGAAAAG 2518489
2518490GTTTACATCCCTCATAGTTCAGATAAGACTGTCGTCCTTGAAAGGTAACCAAGACTCTCGATATAAAT 2518557
2518558GTTTACATCCCTCATAGTTCAGATAAGACTCTCACCTCAGGGTCTCTGGGCACTTGCTGCAAGTT 2518622
2518623GTTTACATCCCTCATAGTTCAGATAAGACTAATACGCAAGAGTGTTTATAAGCTTTATGACAGCTAT 2518689
2518690GTTTACATCCCTCATAGTTCAGATAAGACTTGTAGATGCAGAAAATAAAAAAGTATATCTGCAAA 2518754
2518755GTTTACATCCCTCATAGTTCAGATAAGACAACCGTTTATGCCGCGAAAGCCCTTGACTTGGTGGAA 2518820
2518821GTTTACATCCCTCATAGTTCAGATAAGACCACGGGTCAAATCTTAAGTTTTACAGATACAATATAT 2518886
2518887GTTTACATCCCTCATAGTTCAGATAAGACTTTCACATCACTACCCATGAATTCGAAATCAAACTT 2518951
2518952GTTTACATCCCTCATAGTTCAGATAAGACGGCAATATTATGCAAGCTGTTGCGACCATTGCAATGCT 2519018
2519019GTTTACATCCCTCATAGTTCAGATAAGACTTGCCTCCTCCAACGTCACCGGCTCCACCAGCGG 2519081
2519082GTTTACATCCCTCATAGTTCAGATAAGACCTGTGCCCGGATATACTCAAAGCCTCTGCTGTACCC 2519146
2519147GTTTACATCCCTCATAGTTCAGATAAGACGAAGAATGGCAAAAGGACAAAAAGTAGTAGGATATGA 2519212
2519213GTTTACATCCCTCATAGTTCAGATAAGACTAACTGCCCATATAGTGCCAAATATTGCTAATCCTAT 2519278
2519279GTTTACATCCCTCATAGTTCAGATAAGACCTGAAAGAGAAGGGTGGCGAAGGGCGGCTGTGTATAAC 2519345
2519346GTTTACATCCCTCATAGTTCAGATAAGACTGCGAAATAAATATGTCTCTGACGAGACATTGTCAAC 2519411
2519412GTTTACATCCCTCATAGTTCAGATAAGACCAATACTAAAGGAAACTGCCTTTTGAACGTAGTAAT 2519476
2519477GTTTACATCCCTCATAGTTCAGATAAGACTTGGTGATGTTAGTTGATGGTAAAGAATCTAAAAATAA 2519543
2519544GTTTACATCCCTCATAGTTCAGATAAGACTATTTAGGGGTGGTGGCAAGTATTTCCCACTTGAGCA 2519609
2519610GTTTACATCCCTCATAGTTCAGATAAGACTTGTAACAGGGCTCACAGATTTATATGCTGTGAGGAT 2519675
2519676GTTTACATCCCTCATAGTTCAGATAAGACCAAGGAATAGTGTAAGTTGCCGATTCGAGAACCTGA 2519740
2519741GTTTACATCCCTCATAGTTCAGATAAGACTCTTTGAGCCGTGATGGTTTACGTATAAAACTTTCTT 2519806
2519807GTTTACATCCCTCATAGTTCAGATAAGACTGATAGATAGCTTAAAAATTAATGATAGCTTAAAATT 2519872
2519873GTTTACATCCCTCATAGTTCAGATAAGACGCAGGATAGAAAAGAAAAAGAGTTATATGTACCAGAA 2519938
2519939GTTTACATCCCTCATAGTTCAGATAAGAC2519967
Left flanking sequence : Till position 2513322 (length bp)
ACACTACAGAAGGCTTCTTTTTAAGTGGCAGGTGGGGAATTTTTAGTGTCATTTCTGATGATTTTATTTT
ATCATTAACAATCAATGCAGTTTGGAGCAG
Right flanking sequence : From position 2519967 (length bp)
AGCTTTTTGGAACGACTAATCCAGATAGCCCTTATCATGTTTACATCCCTCTCTCAATATACCTTTGATT
TTCTCAAAATATCTCACGGTTTCTTTAAAT
Print the CRISPR sequence : From position bp To position bp