Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009437_13                                                                                                                 top


Strain : Caldicellulosiruptor saccharolyticus DSM 8903 RefSeq :NC_009437 (chromosome circular)
CRISPR id : NC_009437_13
DR consensus (32 bp) : GGTTAAGTTTACACCCCTCATAGTTCAGATACNumber of repetitions :4
Begin Position : 2533617 End Position : 2533846

2533617TCAATCGTTTACATCGCTCATAGTTCAGATAAAACAGGTCGATATCGAGGCGAGGCGGACTTGAAG 2533682
2533683GGTTAAGTTTACACCCCTCATAGTTCAGATACGTTGAATATGAATCTAAATACTCAAAAGCTGAAAA 2533749
2533750GGTTAAGTTTACACCCCTCATAGTTCAGATACAATTTACCCACTTAATATCTTCAATTGCCCAGT 2533814
2533815GATTGTGTTTACACCCCTCATAGTTCAGATAC2533846
Left flanking sequence : Till position 2533617 (length bp)
AGAAACGTTATAGAAGAAGACTAAGAAAATTTGATTTGTTTCAACAGCTCCATAGTCCAGATAAGACTGT
ATAAAAACAATGAAAGTTCTAAAAATAGTA
Right flanking sequence : From position 2533846 (length bp)
AATTCTTTTTAAAAGTTGGCGGAAGAAATTGATGTTGCTTTCATTATAGCTTATTTCATAAGTCTCTTCA
AGAGGAGTATTTTGCAGCAAGGTGGGAGTT
Print the CRISPR sequence : From position bp To position bp