Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009495_5                                                                                                                 top


Strain : Clostridium botulinum A str. ATCC 3502 RefSeq :NC_009495 (chromosome circular)
CRISPR id : NC_009495_5
DR consensus (30 bp) : ATTTAAATACATCTCATGTTAATGTTCAACNumber of repetitions :5
Begin Position : 2309045 End Position : 2309340

2309045GCTTAAGTACATCTCATGTTAATGTTCAACTGAACTTATGAAAGAACTAGAGTGTGGAGAACCCTT 2309110
2309111ATTTAAATACATCTCATGTTAATGTTCAACATTAGGTTTGCCACCACATTCCGTTACTGCAGTAGT 2309176
2309177ATTTAAATACATCTCATGTTAATGTTCAACTTAAGTATGATAATATAAAACCTTGGTAAATATATTAA 2309244
2309245ATTTAAATACATTTCATGTTAATGTTCAACGAAAAAGGTAAATTAGCAAGTGCAAAAGATTTAGA 2309309
2309310ATTTAAATACATCTCATGTTAATGTTCAAC2309339
Left flanking sequence : Till position 2309045 (length bp)
TTTAGTCAATAAAATCCCACAATTTAACTCAAGAAGTAATAAAGCAAAAAATTATTGCCATGTATAAATG
ATTATTCTAAATCAGATGATTGCATTTCTT
Right flanking sequence : From position 2309340 (length bp)
ATAGTAAAATAGCCATTCCTTATTTTTAAGAATAGCATATACACATTGATTTTACAAGGTTTTAAAGAAA
TTTTCCCAACCGATTCTTATTTTTCATAAA
Print the CRISPR sequence : From position bp To position bp