Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009523_55                                                                                                                 top


Strain : Roseiflexus sp. RS-1 RefSeq :NC_009523 (chromosome circular)
CRISPR id : NC_009523_55
DR consensus (24 bp) : GGCAAAGCCCGCCTGCGCGGGCTA Number of repetitions :2
Begin Position : 3678126 End Position : 3678217

3678126GGCAAAGCCCGCCTGCGCGGGCTATACCGGACTTAATTCCTAAGGATCATAAGCCCTCGGCTATGCGC 3678193
3678194TGCGAAGCCCGCCTGCGCGGGCTA3678217
Left flanking sequence : Till position 3678126 (length bp)
TCTTCGCGTCGTTTGCAACCGGCTCGCCAAAGCTTTTACAGTATGTCGGTCTCGGATAGCGGATTATTTA
TTCAAAGACCATAAGCCCTCGGCTGTACGG
Right flanking sequence : From position 3678217 (length bp)
GAGCGGAATAATTACTCAAAGTCCATTAGTGAATCGCCGTCCGCTCCAGTCTGCACCTTCGGTGTGAACT
ACACCGCCAGCCGCTCAAGGTCGGATCAGG
Print the CRISPR sequence : From position bp To position bp