Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009635_4                                                                                                                 top


Strain : Methanococcus aeolicus Nankai-3 RefSeq :NC_009635 (chromosome circular)
CRISPR id : NC_009635_4
DR consensus (37 bp) : GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACNumber of repetitions :19
Begin Position : 1121706 End Position : 1123032

1121706GTCTAAAAAACACATCCATTAAAACAAGGATGGAAACTCGTGTTCACTTATGGCTATAATCTGTTTTGG 1121774
1121775GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTTCCATTGTGGTAGCTTCATAATTACAGTTC 1121843
1121844GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTAATTATTTCGCATGATGTTGCAGAGCATTGAATAT 1121916
1121917GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACGACATAATATCTCACCAATTTGGTAGTTGTGGCA 1121987
1121988GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTGGAGTTAGCCCTTGCAGGAGTTGGAAAGGT 1122056
1122057GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTTCCCTTATATCTCATTAATAATTTTACGGCGTAGC 1122130
1122131GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTGCATATATAAATTCAAATATGTCGATATTACAAAA 1122203
1122204GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACGGACAGTAAAAACATTATCAGACTATACGGAGGTAAA 1122277
1122278GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTGTTGTTATGTCGGTGTCTGTTAAATCAAATTTCAA 1122351
1122352GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTTTGGAGCCATTCATAATTTTGATTAATTCCAT 1122422
1122423GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTGCATATATAAATTCAAATATGTCGATATTACAAAA 1122495
1122496GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACGGACAGTAAAAACATTATCAGACTATACGGAGGTAAA 1122569
1122570GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTGTTGTTATGTCGGTGTCTGTTAAATCAAATTTCAA 1122643
1122644GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTTTGGAGCCATTCATAATTTTGATTAATTCCAT 1122714
1122715GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACGATCTGATGGAATCATTGAAATTATTGCAAATCC 1122785
1122786GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACATATTTTTGATATTGTTTTCATATTTTGCCTCT 1122855
1122856GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACATATTTTTGATATTGTTTTCATATTTTGCCTCT 1122925
1122926GTCTAAAAGACACATCCATTAAAACAAGGATGGAAACTTGTGGCGTTATTATCTCTATTGTGCAGGTCAT 1122995
1122996GTCTAAAAGACACATCCATTAAAACAAGGATGGAAAC1123032
Left flanking sequence : Till position 1121706 (length bp)
ATTTTATATACTATTTGATAATCAACCAGTAAGAAAAAATTGATAAAAATCGAAAGGCATATAAGGGAGA
AAAACCATAAAAGAAGGTAAGAAGTATAGG
Right flanking sequence : From position 1123032 (length bp)
TGTATATGTATCCTTGGAGCTCCGAGAAATCAGTTTAATCATAATTAGCATTCAAAATAATTATACTTCG
TAATTGAACAATCTCAATCGTTTGGTAATT
Print the CRISPR sequence : From position bp To position bp