Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009718_2                                                                                                                 top


Strain : Fervidobacterium nodosum Rt17-B1 RefSeq :NC_009718 (chromosome circular)
CRISPR id : NC_009718_2
DR consensus (30 bp) : GTTTTAGAAGTGACTATGAGGGATGGAAACNumber of repetitions :13
Begin Position : 1506355 End Position : 1507214

1506355GTTTTAGAAGTGACTATGAGGGATGGAAACAAAGATTTTTCGTTCCCTGTTGAAGTATGCTACTC 1506419
1506420GTTTTAGAAGTGACTATGAGGGATGGAAACTTGCCAACGCTAATTTGTTATCACCATTCTTGAGTG 1506485
1506486GTTTTAGAAGTGACTATGAGGGATGGAAACATATCCGAAAGTTTTTGTAGCAGCTCGTCTGTCA 1506549
1506550GTTTTAGAAGTGACTATGAGGGATGGAAACACTTCCCTTTGTTCGCGAGAAACTTCTTCAAGAACTTCAA 1506619
1506620GTTTTAGAAGTGACTATGAGGGATGGAAACCAAAGTATCTTCTTTACCAACCATACCCAACACCTCCTCTTAG 1506692
1506693GTTTTAGAAGTGACTATGAGGGATGGAAACGCCCTGGAGGCTTTGATGAGCTTGTCAATCTCTTCGGGTGT 1506763
1506764GTTTTAGAAGTGACTATGAGGGATGGAAACCCTAAACCGGCCCCGCTTGTCTGCGGTCCAATCTATTTC 1506832
1506833GTTTTAGAAGTGACTATGAGGGATGGAAACTTCTTTGACGATCTGAATCAGTTCCTCTGTGATAATAGAAAGTTT 1506907
1506908GTTTTAGAAGTGACTATGAGGGATGGAAACTTGTTTGTTCCAATGAAAAGTAAACATCGACGACGTCTTCG 1506978
1506979GTTTTAGAAGTGACTATGAGGGATGGAAACAAAGTTCTGAACTCTCCCTTCCCAACGTTAATGTAA 1507044
1507045GTTTTAGAAGTGACTATGAGGGATGGAAACTTGTACCCCCCCTTTAACAAGCTTCTTACTTCCTTTAAAAAA 1507116
1507117GTTTTAGAAGTGACTATGAGGGATGGAAACTTTAAAATTGCCTCATTTATAATTTTGTCTGGAACTGC 1507184
1507185GTTTTAGAAGTGACTATGAGGGATGGAAAC1507214
Left flanking sequence : Till position 1506355 (length bp)
TCTTTATCTATGCTCTAACTTCACAGATCAGACGAATTTTACAAATGTAACTATCAATTTTAACATAAAA
TGTTGTATATTATATATGAGGGATGGACGA
Right flanking sequence : From position 1507214 (length bp)
TCACTCAATAGTTTCTGTCTCCTAATATCCTACGAAACTGTTTTAGAAATAACTATAAAAATGGAAACAA
TAAAGATCTGGTCAAAGACCAGGCAAAATG
Print the CRISPR sequence : From position bp To position bp