Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_009973_2                                                                                                                 top


Strain : Herpetosiphon aurantiacus ATCC 23779 RefSeq :NC_009973 (plasmid pHAU01 )
CRISPR id : NC_009973_2
DR consensus (37 bp) : ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACNumber of repetitions :93
Begin Position : 102032 End Position : 108752

102032ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTACGGATGAGGCTGCACTCGCCGCTCAGGAGCCGCC 102104
102105ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTTGAAGGGATTCCATGTTTGATATTCACCCGCCGCT 102178
102179ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACACGCATCGATCCGATCATGGATCGCCCACAACTGGT 102251
102252ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAAACCTTTTATAGCTCGGCGCACTATGGCATGAT 102322
102323ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGGGCTTTTCTTTGTCGGGGAGCCATGTTTTGCCTCT 102396
102397ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGCTCAACGTGGTAGGGCAGCTTGCGCGGCAGTT 102467
102468ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACACCCGCAAGGCCGAGCGCCAAGCCCGCATAGGGATTC 102541
102542ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGCGAAGGGGTGGCGCTATGCACAAGCAACCATGGA 102614
102615ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTGTTCGCAAAAATGGCTCAAAACAATATGTGAT 102685
102686ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAAACAACGGGCGATCGGCCAGCGCAAGGCTTCGAGCC 102759
102760ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTGTCCAGCATCAAGCCAACAATATGTATATCTATT 102832
102833ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGAAGCACTTGCGCCGGAAACGGTTGTATTTCGTT 102903
102904ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGAACGTTTTGACCTTTTGCATACCAGACTCACTTT 102976
102977ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTAAACTAACCGACTGGCTACGGCGCGGCGCTGACC 103048
103049ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAATCGAAGTACACCGGATCGCTGCGCCGTGTAGGAT 103121
103122ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGTGCGACACGCACGCCCAAGCCGCGCACGCTAAGC 103194
103195ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCTTGAAACCGATGCACCAGCCCCTCTGCTGTGCGAA 103268
103269ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTGCTTTACGGGGAATACATCTGAGTAATAATTGAA 103341
103342ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGCCATAATTCAACTAGTATCCCCGCGTCAGCCATAA 103415
103416ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCCTTGAAGGATTCTGGGGTGCGGCCAATCGGAT 103486
103487ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATTTTATTGATGGGGCATGGGCCGTTCCCCAGTAT 103558
103559ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCGCTGGGTGATGGGCGTGCCTTGCCAGATGCCAT 103630
103631ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCTAGTACAAACACCAATAAACAGAGTGTCATAGCC 103703
103704ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGCGCAGCTGCGGCACGTTCACCAACTTTGACAGCG 103776
103777ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTATCCAAATAACATTTGCCTATATTGCATCGCACATC 103850
103851ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATTCATCCATGGTTGCCAGAACCTTGGGGGCATAG 103922
103923ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCGATCACGTTGTACGGGCAACGCTTGCCATTAG 103993
103994ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAATGATGGGATGGCGAGGCATGGTTGGGATGGTCTG 104066
104067ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGTCGTCACGGCTATGCGGGCGGTGATCGGCGGCG 104138
104139ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTTCATACTATTGATCAAGCTAATGCTGTTATTG 104209
104210ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAACTACTTGGCAGCACCAATGGTTGATTGACATCG 104281
104282ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGTATGCTGAGCCAATGCACATTGGCATCATTGACC 104354
104355ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATTGATCGCTACTGAGTTGGTGGATGCGTTCGTGC 104426
104427ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCTGCAACCGCCAGTTGAAAGTTATGAATCCAGAGG 104499
104500ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTCTCAGCCATGGGCAGCATGCCGAGCCGTCCAA 104570
104571ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGAGCGCGGTATTCAGGAGCAGGCTCAGGGCTAAGCG 104644
104645ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGCAGATCGGCATCAATACGGTGCGCAAATGCCTGA 104717
104718ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCATTATGATTTAGCTCCATCGAAGCGAGCGTTGG 104789
104790ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCGTGTGCATCATAATCAAGCATGGAGGTTTGCGGGCT 104864
104865ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTACTGGCGTTCATCGCAAGCACGGCCACGTCCACT 104937
104938ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTATCGGGCTTGAGTGCTTGTGACATGTTGATGGCAA 105010
105011ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCGCTATCGCCGCCTCTTCAACGTTCTCAGTCGCTT 105083
105084ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGATTTTTGAGCCTGCTTCTCTTGCTGGCCGTTTG 105154
105155ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAACATATCGTCATAGCGCCATACCAGTGGATTATTCG 105228
105229ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACCCGCTATAGGGGTCATTGTGCCATTCAAGCATCCGG 105301
105302ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACCAGAGCTAGCTCTGGCGGTTGAGCACAGTCGTAAG 105373
105374ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTCAGCTCGTTCGCCATAATTCGGTACATCCATTTC 105446
105447ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCCATGGCATCCGCGTTGTCGTTGCGCTGTTACAT 105518
105519ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATCCACACCACCACCACCACCGCTAGCGCTCGCAGC 105591
105592ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCCCCGGCTCCAGCTCCCGCATGGTCAATGGAGTGG 105664
105665ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTCAACCATACACGATGGGACAGTTAAGGCATTCG 105736
105737ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATGGCGAAGCCGTTCTTTTGGTTATGGATTACTGC 105808
105809ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTATCTAGCGCTAGGGCAATGCCTAGACGTTCAT 105879
105880ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATAGCCATACCAACATCACCAGCGCTGATGTGCAGT 105952
105953ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGACCCTGACCACTACGCCCCGCTAACGATTGAGCC 106025
106026ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATAATCCGACAACAGTTTATCGAAGGATTTAACCAT 106098
106099ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACATGCCGACCATAGCCAAGAACATATTGACGTGCGCAT 106172
106173ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTTTTTTCGTCAAGGACACTGATTGGCTCGTGTA 106243
106244ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACCACGGCTGACGACAGCACCTTAACAACGCTTAC 106313
106314ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCGAAGGCATTGCTCGTAACATCATGAACGCGACTG 106386
106387ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCTCTAGCAGCGCTTGTAGCTGCTGTAGTTCAGCG 106458
106459ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGCTTGGATAGAGGATTTGGAACTCTGGATCAACG 106530
106531ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAAGTGAAACTAAATGGCTGGGGTGGGCATTTCGTC 106602
106603ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTCGGCGGTGATAATCAAGCCTCCGGCGTAGGGCT 106674
106675ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCGCTGCAACACCAACGAGGCAGGCGCGGCGGGTG 106746
106747ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACCAACACACCGCGCCATCGGTGTACAAGTTCGGGAA 106818
106819ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCGCTGCAACACCAACGAGGCAGGCGCGGCGGGTG 106890
106891ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACCAACACACCGCGCCATCGGTGTACAAGTTCGGGAA 106962
106963ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGTATTAGGATCATCAGCATCAGCACGATTTTGATAA 107035
107036ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTATCGGTTGATGGGGGAAAAACTGGGGGCGGGGACGA 107109
107110ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCATTGCTGCGGGCACTATACCAACGGTATTGATTTA 107183
107184ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCAACAAGCTCAACCACGGGGAAGCACTGACAAAAG 107256
107257ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGATCATTGAAGGGTCGCTGCGGCACTACATCGAAGT 107329
107330ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGTTAGACCGTGCGGTGTTGCAATCTGTAGGTGATG 107402
107403ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCCTCACCGAGCGGCAGGCGTGGCAGACGTAAGCT 107474
107475ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCGAGAAGGGACTAGAACCGCCGAAGGCGCACCATTT 107548
107549ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAACAGCGGAGTAGTGTATGCAAGTATTTTCAGTGCT 107621
107622ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACACGCTTTAACCGCCGCTGCATACTCTGAATCGCTTT 107694
107695ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGTAATCGACTTCAAAGCCTCGTACTGAGGCGTAC 107766
107767ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTACATGGTCGGGAGGGGAAAGATGGGTCAAAACAG 107839
107840ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGTGCTTCGGCTTGTTGCTCGCGGGTATTGCCGAGC 107912
107913ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCTGCTACCGTTGACGAATGCCTGAGCGCGTTTAT 107984
107985ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGTTGTAAGGCCTGATACAGCATAATCAAGTCGGGAT 108058
108059ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCTGCTACCGTTGACGAATGCCTGAGCGCGTTTAT 108130
108131ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGTTGTAAGGCCTGATACAGCATAATCAAGTCGGGAT 108204
108205ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTCAAAGGCGTTGTATTCCGGTTTCCATGCGTCGGG 108276
108277ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAGTGCTTCGGCTTGTTGCTCGCGGGTATTGCCGAGC 108349
108350ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACGCCAGCGGCACAACAACAACTTTAGTGGAGTGAATG 108422
108423ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTGGGTTCCTGAGGGCCAACGTGCGCCTCGCATGAATG 108496
108497ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACACAGCATCATCCATATGGATGTTGGGAGTCAGTTT 108568
108569ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACTTGCCAGGTCAAGGCGCTGGTTCTGTTCGTTTTGCT 108641
108642ATTTCAATTACTCGATCCGATTAGAGGATACTGAAACAAGATTTCGTAAGCATGCTGTACCGCCTCAAAGCGT 108714
108715ATTTCAATTACTCGATCCGATTAGAGGATACTGAAAC108751
Left flanking sequence : Till position 102032 (length bp)
CCTGTGATGTTGCTAAAATTGGTGGTCTAGAAACGTTGCTGCTGCGTGAAAATCTGCATGCGTGACAGCC
AAGACCTATCCAATCCATCCCAAATCGGCT
Right flanking sequence : From position 108752 (length bp)
CGCGCACTTGGCCAACCTTGGGCATTGGACAAACGTATTTCAATTACTCGATCCGAATTAGAGGATACTG
AAACTATCCAAATAACATTTGCCTATATTG

Print the CRISPR sequence : From position bp To position bp