Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_010080_3                                                                                                                 top


Strain : Lactobacillus helveticus DPC 4571 RefSeq :NC_010080 (chromosome circular)
CRISPR id : NC_010080_3
DR consensus (32 bp) : ATTTCAATCCACGCACTCACAAGGAGTGCGACNumber of repetitions :22
Begin Position : 1587579 End Position : 1589020

1587579ATTTCAATCCACGCACTCACAAGGAGTGCGACCCGAAAACTTCAAACACAGTACCGTCAATATCCTT 1587645
1587646ATTTCAATCCACGCACTCACAAGGAGTGCGACTCTAGGGTCAATACCGTTCACTACTTCCCAATTA 1587711
1587712ATTTCAATCCACGCACTCACAAGGAGTGCGACTGCAAAGCCATTTAAGCGTCCATAGGCTGTATATT 1587778
1587779ATTTCAATCCACGCACTCACAAGGAGTGCGACCACATAGATTGGGTGACCATCACCATATATTACATA 1587846
1587847ATTTCAATCCACGCACTCACAAGGAGTGCGACTGTCATCTTTAGCTAAAGTACCTTTAATCTTGTAA 1587913
1587914ATTTCAATCCACGCACTCACAAGGAGTGCGACATTGTTTTGAATAATATTGACACTAGTCCTGATAAA 1587981
1587982ATTTCAATCCACGCACTCACAAGGAGTGCGACTCTTAGATTGGTCGTGCCGTTAGCGTAGCCATTAA 1588048
1588049ATTTCAATCCACGCACTCACAAGGAGTGCGACAGCAAGCGCTGGTAGTGCTTGATTTGGTCATAGTA 1588115
1588116ATTTCAATCCACGCACTCACAAGGAGTGCGACATCTTTTTTCTGCTGTATCCTGCGAATCTCTGCA 1588181
1588182ATTTCAATCCACGCACTCACAAGGAGTGCGACGTAGCCGAATGGTTGATTTGTCGTCACCTAGTTTT 1588248
1588249ATTTCAATCCACGCACTCACAAGGAGTGCGACTTTTTTGAATCGAACAAGGAACAAGGATAACAAAA 1588315
1588316ATTTCAATCCACGCACTCACAAGGAGTGCGACTTGCTATATGTAGCTGTAAACACCATCGTGATCTT 1588382
1588383ATTTCAATCCACGCACTCACAAGGAGTGCGACTGCCCTTGTGTACAATATTAACAGCAGACATAAATAA 1588451
1588452ATTTCAATCCACGCACTCACAAGGAGTGCGACTTTAAGGCTGTTTTGATTCGCGCCCCGATCAACT 1588517
1588518ATTTCAATCCACGCACTCACAAGGAGTGCGACAATATGATAGTATAAAAATGTAAGCTAGTTAAAA 1588583
1588584ATTTCAATCCACGCACTCACAAGGAGTGCGACGCTTATAAGGCTATTGCTTAGTTCTTGCTATGCGA 1588650
1588651ATTTCAATCCACGCACTCACAAGGAGTGCGACCAGTGTACGAATTAAGTACGTACTCTGTATGGAGT 1588717
1588718ATTTCAATCCACGCACTCACAAGGAGTGCGACGTTCACCCGTTTGCATGTTTTGGTATATAGTACAAGT 1588786
1588787ATTTCAATCCACGCACTCACAAGGAGTGCGACGTCAATTGTTAAAGCGACTGTTGCAGTCTTGTCAAT 1588854
1588855ATTTCAATCCACGCACTCACAAGGAGTGCGACGGATACGCCCTGCGATACTGCTACAATCACGATCA 1588921
1588922ATTTCAATCCACGCACTCACAAGGAGTGCGACATATAAGTACAGTTAGGTTATATCAAGTTATAAAT 1588988
1588989ATTTCAATCCACGCACTCACAAGGAGTGCGAC1589020
Left flanking sequence : Till position 1587579 (length bp)
AGTACTTCAAGCCTGGGTTGAAGAAGCCGACTAATACACCCACAAGTGCATCACAAGGAGTGCGACACGA
CTTCACTGGCAAGAGCGCAATGGACCTAAA
Right flanking sequence : From position 1589020 (length bp)
CGCAATATTTAGATCATGATTTCAATTCATTTCTAAATATTGGGCTTCAAATTAACTTACCCTGATAAAA
ATATATTTTTTATCAAAAGATCACTTTTCA

Print the CRISPR sequence : From position bp To position bp