Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_010655_2                                                                                                                 top


Strain : Akkermansia muciniphila ATCC BAA-835 RefSeq :NC_010655 (chromosome circular)
CRISPR id : NC_010655_2
DR consensus (33 bp) : GTTTCAATCCACGCACTCCTTGCGGAGTGCGACNumber of repetitions :4
Begin Position : 2507588 End Position : 2507825

2507588TTTTCAATCCACGCACTCCTTACGGAGTGCGACGGATGTTGTGACGGCCAGACAAGCAACGAGCAATA 2507655
2507656GTTTCAATCCACGCACTCCTTGCGGAGTGCGACTTTCTATTGTTTTTATCCTCCGGAATCCGGGGTACAG 2507725
2507726GTTTCAATCCACGCACTCCTTGCGGAGTGCGACATAATATGACCATTGTAGCTGATAATATATGGGG 2507792
2507793GTTTCAATCCACGCACTCATGAGAGTGCGACTC2507825
Left flanking sequence : Till position 2507588 (length bp)
CAGAACTCAATCTCAATAATCACCCCTCTTCCTGACAACTTAACAAGATGATGGAACAAAAAAAGCTCTC
TAGACCAAACAAGCTCGAAGAGCTTTTTCT
Right flanking sequence : From position 2507825 (length bp)
CTGGGCGTCTATGGCACTGATTATCAACAGTGCAACGGGCGTTTTGCGCCAACCTCCCATGGGAGGTACA
AAGATTCCAGGTCGTAAAAAGAGATGATAG
Print the CRISPR sequence : From position bp To position bp