CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011080_2
Flanking alignement tool
Page manual
  
Home Page
NC_011080_2                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Newport str. SL254
RefSeq :
NC_011080 (chromosome circular)
CRISPR id :
NC_011080_2
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
20
Begin Position :
3073142
End Position :
3074328
3073142
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ACGGCAACGGATGCGACCGCCAGCGCGATCC
3073201
3073202
CCGGTTTATCCCCGCTGCGCGGGGAACAC
TTGATGAAAGTTCATCTAATAATGATTGTGCT
3073262
3073263
GGGTTTATCCCCGCTGGCGCAGGGAACAC
GAACCGCTTTTATTTTTAGACATAGAGCACCG
3073323
3073324
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCCACCCGGACAACAAAATGAATCCCGATGAT
3073384
3073385
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTCAAACTGCTTGCGGTAAGAAACTGTTGCAC
3073445
3073446
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCACTCCCGACCGTTGAGGTGACAAAACCCT
3073506
3073507
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AACCCTTACGGTTATATGAAAGAAGATTTTTA
3073567
3073568
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGGCATATCAGGAGTTGGAGCAACCAGCGAGA
3073628
3073629
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGACCTGAAGAAATAACATTGACTCCAAACTG
3073689
3073690
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTTTCTCTACATTTAGCTATAGACGTTAGTT
3073750
3073751
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGCCTGACTTTATCAAGCAGTGCATACTGAC
3073811
3073812
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAACTCTGGGCGCTCGAATGGCTGTCCTATTG
3073872
3073873
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGCGGTGTAAATTTTTACGTTTTTCATATCT
3073933
3073934
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAGACTTTTCACACTGATAATGTTGTTATTTT
3073994
3073995
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTGTCGCGGTAGTATTTAGTCGAAAGCATGA
3074055
3074056
CGGTTTATCCCCGCTGGCGCTGGGAACAC
ACGGCCTGATTTAGAGTTAAACATGGTCACGC
3074116
3074117
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TACGGGTTGTACCATGCCACTGGCGTTTTGTG
3074177
3074178
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATGGCGTGTCTCGATTGCGCGCTGCCGCACTG
3074238
3074239
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTCCCATTTAGCGAGTTCTTTTGCCGCCAGCA
3074299
3074300
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3074328
Left flanking sequence : Till position 3073142 (length
bp)
CATGGCCTTCTCCTGTATAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3074328 (length
bp)
ACTAAACGGATATCATTGTTTATAAACTACTTTTTATCAGCATTACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp