Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011147_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 RefSeq :NC_011147 (chromosome circular)
CRISPR id : NC_011147_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :8
Begin Position : 2885105 End Position : 2885560

2885105GTGTTTATCCCCGCTGGCGCGGGGAACACGAATCATTCTGTCACGAACAATTATATTTTCT 2885165
2885166CGGTTTATCCCCGCTGGCGCGGGGAACACGACATTTGACACTATGCGCGATGATGCAATCG 2885226
2885227CGGTTTATCCCCGCTGGCGCGGGGAACACCGTTTACGTTTGCCGACGATTTAACTAAACAG 2885287
2885288CGGTTTATCCCCGCTGGCGCGGGGAACACAGCGCCGCCCTCGCGTAGAAAGTGTTCGTGTG 2885348
2885349CGGTTTATCCCCGCTGGCGCGGGGAACACCTCATTACGATGTGACGCAATACCGTGCTGTC 2885409
2885410CGGTTTATCCCCGCTGGCGCGGGGAACACAGCATTTTCTTTGCTGGCCCCCATTTGGTGTA 2885470
2885471CGGTTTATCCCCGCTGGCGCGGGGAACACACGTAGCCGGTACAACTGACGCAGTAGACGTG 2885531
2885532CGGTTTATCCCCGCTGGCGCGGGGAACAC2885560
Left flanking sequence : Till position 2885105 (length bp)
GGCGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 2885560 (length bp)
TCTAAATCTACCCAATTGAATTTAAATACTTTTTTAGCGCACAAAAAACCCACCAACTTTTCCTAATTTT
TAAAGATCTCTAACTTATTGATTTTCAACA
Print the CRISPR sequence : From position bp To position bp