Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011415_4                                                                                                                 top


Strain : Escherichia coli SE11 RefSeq :NC_011415 (chromosome circular)
CRISPR id : NC_011415_4
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACTCNumber of repetitions :21
Begin Position : 3142093 End Position : 3143341

3142093TGGTTTATCCCCGCTGGCGCGGGGAACGCGCCTGACATTGCAGACGTTACAAATTGAGAGG 3142153
3142154CGGTTTATCCCCGCTGGCGCGGGGAACTCTAATCACGTTTTAGCGCGCCCTCGTCCGGTTT 3142214
3142215CGGTTTATCCCCGCTGGCGCGGGGAACTCATCACGATAACGCTGCTGTGATTCGTCCCCGT 3142275
3142276CGGTTTATCCCCGCTGGCGCGGGGAACTCAAGACGACGTGATCCGCAAAGTCGAAGGCACG 3142336
3142337CGGTTTATCCCCGCTGGCGCGGGGAACTCTGTTTTTCTGCCGGTTTAACACGGTGCGATAA 3142397
3142398CGGTTTATCCCCGCTGGCGCGGGGAACTCTGTTTCTGTCCCAACTGAACAGCGCCGATAGT 3142458
3142459CGGTTTATCCCCGCTGGCGCGGGGAACTCTTGTCCAGACTCCCGATTGTTTTGCCGTCCGC 3142519
3142520CGGTTTATCCCCGCTGGCGCGGGGAACTCCTGGTTTCTTTTTTTCTGCTCCGGTGAGAGTT 3142580
3142581CGGTTTATCCCCGCTGGCGCGGGGAACTCGTGTTAACTGACAAAACCGTACTGCGTTTCGT 3142641
3142642CGGTTTATCCCCGCTGGCGCGGGGAACTCGAATGATCCCAAATTTGGGTTACAGAACCAGT 3142702
3142703CGGTTTATCCCCGCTGGCGCGGGGAACTCGGACTTAAAGATCGCATCACAGTACTGGAGGG 3142763
3142764CGGTTTATCCCCGCTGGCGCGGGGAACTCATGAAATGCAGGAACGTGAATTTCTCGTCCGG 3142824
3142825CGGTTTATCCCCGCTGGCGCGGGGAACTCGGGATAAATCGGCCCGCATTGGCGGGCCTTTG 3142885
3142886CGGTTTATCCCCGCTGGCGCGGGGAACTCAAAGGCAATACGGCGGGCATTCAGTTGCCAGC 3142946
3142947CGGTTTATCCCCGCTGGCGCGGGGAACTCCCGCAGCGTACGCACGAGAGTCAGTGCAGTGG 3143007
3143008CGGTTTATCCCCGCTGGCGCGGGGAACTCCCCTTGATGAGGACGGGCCGGGCGAGCTTGTT 3143068
3143069CGGTTTATCCCCGCTGGCGCGGGGAACTCGGCAATCCGTTGGATTCATTGTTTTGTTGCTC 3143129
3143130CGGTTTATCCCCGCTGGCGCGGGGAACTCAATAACTCGCGTAAATGCTCTGCGGCGCTACG 3143190
3143191CGGTTTATCCCCGCTGGCGCGGGGAACTCCCTCCTGTACCACGATCGCGCCCTCATACCCC 3143251
3143252CGGTTTATCCCCGCTGGCGCGGGGAACTCCAAAAAACGCCGCGTTTTTTGCATTTTATCGG 3143312
3143313CGGTTTATCCCCGCTGGCGCGGGGAACTC3143341
Left flanking sequence : Till position 3142093 (length bp)
CATGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAA
AACTTGAGAAAGAGATAACGGGTTATATGG
Right flanking sequence : From position 3143341 (length bp)
TGTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCAC
ACAAACAACACATCCATTATGTTAAAGAGC
Print the CRISPR sequence : From position bp To position bp