Institut de Génétique et Microbiologie

CRISPR details


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NC_011653_5                                                                                                                 top


Strain : Thermosipho africanus TCF52B RefSeq :NC_011653 (chromosome circular)
CRISPR id : NC_011653_5
DR consensus (30 bp) : GTTTTCATTCCTCATAGGTAGATTCTAAACNumber of repetitions :38
Begin Position : 499002 End Position : 501657

499002GAACACATTGCTAATAGGTAAATTCTAAACAAAAACGACATATTTTGAAAAAGTACTGTTCAAAGAAAT 499070
499071GTTTTCATTCATCATAGGTAGATTCTAAACTCCGAACTGGCCCACCAACCGGCGCCTTCCGCACATTAT 499139
499140GTTTTCATTCCTCATAAGTAGATTCTAAACTTTTGCAGACGCCTGCAAAATCGTTTTTGGTAGGAGATTCAA 499211
499212GTTTTCATTCCTCATAGGTAGATTCTAAACTCCGAACTGGCCCACCAACCGACGCCTTCCGCACATTAT 499280
499281GTTTTCATTCCTCATAGGTAGATTCTAAACGCGGGTTTTTTATTTGTACCTGCGTCTGGAGCACCTTTTTTGT 499353
499354GTTTTCATTCCTCATAGGTAGATTCTAAACCTTTATTAAATGCATTACCTTACATAAAAGTTAAAAAG 499421
499422GTTTTCATTCCTCATAGGTAGATTCTAAACTCCATTCTTACAATTGTGTTAAATATCACTGAGGAACCCGCATAC 499496
499497GTTTTCATTCCTCATAGGTAGATTCTAAACTATAGTTACAAAAGACGAAATATTTGTTGTTCCATGCAACTATT 499570
499571GTTTTCATTCCTCATAGGTAGATTCTAAACGAATACAAACCATCAATCTGGACAGACGCATACATTC 499637
499638GTTTTCATTCCTCATAGGTAGATTCTAAACTCTTTTAAACGATTATACAGTTCCTTGCCGATAGGATGT 499706
499707GTTTTCATTCCTCATAGGTAGATTCTAAACGGTTATATACAAAATAAAGGGCCCTGGAGCCCTTTATAGTAA 499778
499779GTTTTCATTCCTCATAGGTAGATTCTAAACTGTCTGAGTAGGGAAGGGAGATGACCAAAAGAACCTTGG 499847
499848GTTTTCATTCCTCATAGGTAGATTCTAAACCTGGACTGATGGCTGGAGAAACGAATTTTACGAGGCTGCAAA 499919
499920GTTTTCATTCCTCATAGGTAGATTCTAAACGGACCTTTTTTACATAATTATATCACATTTTGATTTAAATAA 499991
499992GTTTTCATTCCTCATAGGTAGATTCTAAACTGGCAACTATTAAGCGAGTTTGGAGAAATAGGAAATGA 500059
500060GTTTTCATTCCTCATAGGTAGATTCTAAACGCCTGTAATTTGTCCTATAACATGTCTTGTGCGAATTGGTGT 500131
500132GTTTTCATTCCTCATAGGTAGATTCTAAACATATTGAATTCAAAATAGCGCTTTTTTCGGCTTCTGACACTGTT 500205
500206GTTTTCATTCCTCATAGGTAGATTCTAAACAAAAGTGAATAGGTAGGTGGCGAAAGTAGGGCGCCTGAGGAGGA 500279
500280GTTTTCATTCCTCATAGGTAGATTCTAAACATTTAAGAGATGCAGTTAAAGATTTTAATTTGAACAAGTGGAT 500352
500353GTTTTCATTCCTCATAGGTAGATTCTAAACCAGTATATGAAGCTATTGCAAGAAAAAGAGATAAGCAAACAAT 500425
500426GTTTTCATTCCTCATAGGTAGATTCTAAACGGATATTATGATGTTAGTAAAAAGATTTGATTTAGTCAA 500494
500495GTTTTCATTCCTCATAGGTAGATTCTAAACCCGAGTTATTCCAAAATTATTATTTTGGGGCACATTGGAAACATTA 500570
500571GTTTTCATTCCTCATAGGTAGATTCTAAACGTTTTTCAGAGTAGGTATAATGGCTCCTTAAATAGGTTTTA 500641
500642GTTTTCATTCCTCATAGGTAGATTCTAAACCAAAATGGCGAACATCATTAGTTGTAAGAGAATGGAGTT 500710
500711GTTTTCATTCCTCATAGGTAGATTCTAAACAATAGACATCGTTACGATGGAAAATTTACCACAAGCTATTGGTT 500784
500785GTTTTCATTCCTCATAGGTAGATTCTAAACTCCTTTTTTAGATGCAACAGCTTTTATGAGATATTATTATTTA 500857
500858GTTTTCATTCCTCATAGGTAGATTCTAAACCATGGTTATAAATTTAAGTATTTTTGGGTTAAGGAGTTG 500926
500927GTTTTCATTCCTCATAGGTAGATTCTAAACTTATATGCAAAACGTGGCAGAAACACAATTGTGTTTACTC 500996
500997GTTTTCATTCCTCATAGGTAGATTCTAAACAAGAATTACTATATAGGCAAAAGAATAAGTATTAATTC 501064
501065GTTTTCATTCCTCATAGGTAGATTCTAAACTGAATTTATTGAATACACGGGTATAATTCAAGATGTAATTTTC 501137
501138GTTTTCATTCCTCATAGGTAGATTCTAAACAACGTTCGAAGTAACAGGATTAGACAAAATTACCAAGG 501205
501206GTTTTCATTCCTCATAGGTAGATTCTAAACCAATTATGGTGTCAGTTACTACATTGTATAACACGAAAATGAA 501278
501279GTTTTCATTCCTCATAGGTAGATTCTAAACTATGAAACTAACCAAGAGGACGGGAGCGGGCGAGAAACAAA 501349
501350GTTTTCATTCCTCATAGGTAGATTCTAAACTGAGAAATATATCGAACAATTTGTAAAAGATTACAACTCAGACC 501423
501424GTTTTCATTCCTCATAGGTAGATTCTAAACTTTTTAAAAGAAGCAGAGGACTATCTAGAAATAACA 501489
501490GTTTTCATTCCTCATAGGTAGATTCTAAACTTACTAGAGCAGTTTGAGGGGTTCATTCAAGAAGTTCT 501557
501558GTTTTCATTCCTCATAGGTAGATTCTAAACACCTGTTTGCCAAAATAAGAAACAGAAAAACAATTGAATT 501627
501628GTTTTCATTCCTCATAGGTAGATTCTAAAC501657
Left flanking sequence : Till position 499002 (length bp)
TAAATGAAAATCCTACAAGATAGTTAATTGTGGCAGTAGATTTTAATTATGCATATGATTTTAAACTTCA
AAGTTGGAGAAGTAAATTATTAATTATTAT
Right flanking sequence : From position 501657 (length bp)
TATAACTATTCTCATAAATAAATATAACAAGAAAAAGTAACAAAACCTTTGAGTGGAAGTAAACGGTAAG
TTAAATCTAGAATTTATGAGCTTTTATTTA
Print the CRISPR sequence : From position bp To position bp