CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011653_6
Flanking alignement tool
Page manual
  
Home Page
NC_011653_6                                                                                                                 
top
Strain :
Thermosipho africanus TCF52B
RefSeq :
NC_011653 (chromosome circular)
CRISPR id :
NC_011653_6
DR consensus (30 bp) :
GTTTTCATTCCTCATAGGTAGATTCTAAAC
Number of repetitions :
33
Begin Position :
752132
End Position :
754423
752132
TTATTTATTTTTCATAGGTAGATTCTAAAC
ACCAAATCCTTCCATTGAAAGGCCGGTGATGTAAATT
752198
752199
GTGTTTTTTTCTCATAGGTAGATTCTAAAC
TCTGGAGAGGCATTAAAACCGGTTTTTGTCAAAACAAGAGGACAT
752273
752274
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TGAACCTGTGTTATATGCCCAACTCACTGGTAAAT
752338
752339
GTTTTCATTCCTCATAGGTAGATTCTAAAC
ATGCAAATGAGAAATATTAAAAAAGAAATTGAAAAGAAGTATGG
752412
752413
GTTTTCATTCCTCATAGGTAGATTCTAAAC
CGCAACAACAAGCAATATTGTGGGCAAGGATGGAAGAACAC
752483
752484
GTTTTCATTCCTCATAGGTATATTCTAAAC
GAAGGTATGTTAAAGTTACATGATAAATTACAAAACACA
752552
752553
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TGTTTTTTCTTCTCATGTGCTATTCCTTCTAATAGTGGT
752621
752622
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GTGTTTTATGTCTCTTGCTGGATCATTGAATTCCTCGGTGTTTTC
752696
752697
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AAGTGAATATTACCAGGGTTCGAAGCGGGCTCCTGCTTGAACCTGAA
752773
752774
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TGTAGACGGCTCCCCTTTAAAGCCCGTCTATATTAAGAG
752842
752843
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TGTATTAAGTCCCCAGGCTGGCCAAATCGGGTCTGGGATAAAAT
752916
752917
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TCGAACTAAATTCGGGTCTGTGCAAGGATTGCCAGACCCACAA
752989
752990
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GAATTAGACGCGCAAGTGTACCAAGGTCCAAGAA
753053
753054
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GTTGTAGTTGGTTCTGGGGTAGAATGAGCAAAAGCAA
753120
753121
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AAGACGCGATTTTCGCGTATTGGAGGCATCCGAGAGCCTTTGC
753193
753194
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GATAAAGAGGGAAGTAACATTTTATTTAGATTTGCACAATTT
753265
753266
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AATAATCGCAGATGACGACGATGAGGAAGACAACGATG
753333
753334
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GAAAAAGAATCGCTACAGACATGGCAAAAAGCATTGG
753400
753401
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TAACCGAAAAAGAATTGAGGCAAATGATAAACAACAAAATTAAA
753474
753475
GTTTTCATTCCTCATAGGTAGATTCTAAAC
CAATATCCCGCTTGAGGAATACATCAGAAAATTCATTCA
753543
753544
GTTTTCATTCCTCATAGGTAGATTCTAAAC
TAATCAGGGACCCAGATGTATGGGGGGCTCCCTGGGAGTGT
753614
753615
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GAAATAAAACAATTCAACGAAAAAATCCTTGATGCCC
753681
753682
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AGAAAAGAAAGGAGCTGATAGAATGTGTAGACTACTTG
753749
753750
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AAAGGTAAAGAGATTTGGGGGGTTTTTGAAACCAAGAAATACAA
753823
753824
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GGAGAAATTATGAGGAAAATTTACGAATCAAAAAAGGTAGATAA
753897
753898
GTTTTCATTCCTCATAGGTAGATTCTAAAC
ACGAAGGCTATGACGATGAAGAAGAGGATTATTAATA
753964
753965
GTTTTCATTCCTCATAGGTAGATTCTAAAC
CGATGCAATGCCTGGAGCTGCTGCAAGTGCTGCTAATA
754032
754033
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GATTTACGAAGTGCAATTAATACTGTTATAGAACCGTTAACA
754104
754105
GTTTTCATTCCTCATAGGTAGATTCTAAAC
GCATCATTACAACTTGGTATGGGAATATGCAAAAGCGTTCAA
754176
754177
GTTTTCATTCCTCATAGGTAGATTCTAAAC
ACATTACCTTTAAAGCTAATACATGGCGTTAGTAAAAGCACAC
754249
754250
GTTTTCATTCCTCATAGGTAGATTCTAAAC
AAAGATTATCGTGAAATTCAACAACGAAATGGAAAAAA
754317
754318
GTTTTCATTCCTCATAGGTAGATTCTAAAC
CGAATAATAATAATCGACAACAGATTATTCTGTGATTGGAAAATCA
754393
754394
GTTTTCATTCCTCATAGGTAGATTCTAAAC
754423
Left flanking sequence : Till position 752132 (length
bp)
CCGGTCTTTGATCTACATATTCTTGAACCTTTTAAACAATTTAAAAAATATAAATTTTTTGAAAACTATA
TCAAAAACAAATACTCGTTTAAAGAAATAA
Right flanking sequence : From position 754423 (length
bp)
TTACTGAGGTGTAGCCCTTTTTTCTACCCTTACTCTTTCCACCTTCTCTGTTACATTGGCCAGGGTGCTT
GATAATAAACTTCTATTTCCCTTTTCACAG
Print the CRISPR sequence : From position
bp To position
bp