CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011653_9
Flanking alignement tool
Page manual
  
Home Page
NC_011653_9                                                                                                                 
top
Strain :
Thermosipho africanus TCF52B
RefSeq :
NC_011653 (chromosome circular)
CRISPR id :
NC_011653_9
DR consensus (30 bp) :
GTTTCAATTCCTACAAGGTAAGGTACAAAC
Number of repetitions :
22
Begin Position :
1182958
End Position :
1184387
1182958
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TATGTAGCTGCTTTATCCGTGCTTATACCAACTTTTG
1183024
1183025
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TTAATCCCCTGGATCAAGAACACTTTCTTTATATTCT
1183091
1183092
GTTTCAATTCCTACAAGGTAAGGTACAAAC
GCAATTTTACTACTTATTCTAATTTTAAAAACAAAG
1183157
1183158
GTTTCAATTCCTACAAGGTAAGGTACAAAC
CGAATAGACTAAATGAATTATTGAAGCAAAACAACTT
1183224
1183225
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAATCCGCTCTCACTAACTATTAATGCAACAAAAATT
1183291
1183292
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TAAAAATCGAAACAGATAGATGTTCCTATTCATTTAT
1183358
1183359
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAGAAGTTGTGCGGTCATGTATTCTATTGTTCTTTCAAT
1183427
1183428
GTTTCAATTCCTACAAGGTAAGGTACAAAC
GCAAATCTGAGACAACTTCAGACCTGATAGCAGAAAT
1183494
1183495
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAGAAATTGGAAGAACTAAAAGGAGGTATAAAACAG
1183560
1183561
GTTTCAATTCCTACAAGGTAAGGTACAAAC
CGAACTTGAAAACAAAGTTTCAATAGAGCAAAAAG
1183625
1183626
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TATAACCCATTAGAAACAACAGGCGATGAAAAAGAAA
1183692
1183693
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TAGAAACAGATGGTACAATTAAACCAGCAGAATATA
1183758
1183759
GTTTCAATTCCTACAAGGTAAGGTACAAAC
CCGGATACACTTTAAGTTTCTCTGGCAAATATAAAGT
1183825
1183826
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAGGAAGTGTTGAAGTGGCAATTGAAGGAGTTTGCTG
1183892
1183893
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TGACGAAGCGCCTGAAGCATACAAGGACATCATGTA
1183958
1183959
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AATGGTTCTTCCGTAAAAGATAAATAGCCAACAAAA
1184024
1184025
GTTTCAATTCCTACAAGGTAAGGTACAAAC
ATTTATGGAAACGGTTCCATATGGTATAGTTTGAG
1184089
1184090
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAGGAGGTAACATTATGGCACAGAACGTTGTGAATGC
1184156
1184157
GTTTCAATTCCTACAAGGTAAGGTACAAAC
TAGTTCTTTCACTCAACTCCGCCCCGCGATATTGCTA
1184223
1184224
GTTTCAATTCCTACAAGGTAAGGTACAAAC
AAGTAACCCTTCAAGACACTTCCATCGTATATCCATG
1184290
1184291
GTTTCAATTCCTACAAGGTAAGGTACAAAC
CACCACCAGAAGTTATTAATTTTACCCATGCATCAGC
1184357
1184358
GTTTCAATTCCTACAAGGTAAGGTACAAAC
1184387
Left flanking sequence : Till position 1182958 (length
bp)
CTACAAGGCAAAGCGTATACTTGTATCTTCTGTTATTAAATTCCTACAAGGAAGGTATAAACATTTTTAA
CACGTTTTTTGTATTTCTTTTGCTATATAA
Right flanking sequence : From position 1184387 (length
bp)
CATAGATTACATTATAATTATATTACATGTCATTACTTTTTGCAACCTTTTTGAAAAAATCATAATAAAT
AATAAACAATATTAACGTAATATATTTTAA
Print the CRISPR sequence : From position
bp To position
bp