Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011660_1                                                                                                                 top


Strain : Listeria monocytogenes HCC23 RefSeq :NC_011660 (chromosome circular)
CRISPR id : NC_011660_1
DR consensus (29 bp) : ATTTACATTTCATAATAAGTAGTTAAAACNumber of repetitions :28
Begin Position : 2094578 End Position : 2096358

2094578TTTATGATTTCATAATAAGTAGTTAAAACTCCGATTGCATTAGCTTTTACAGGTGCTTTGTTAGT 2094642
2094643ATTTACATTTCATAATAAGTAGTTAAAACGGACGCTAATTTTGTAAATCCGTTTTTCATTGTTA 2094706
2094707ATTTACATTTCATAATAAGTAGTTAAAACTGATGGCGCTAAAAAAGCATGGGGAGCGGTTCAAGAT 2094772
2094773ATTTACATTTCATAATAAGTAGTTAAAACAGGAATTTCCAGAGGAGCATACTCGCACATTGAAAA 2094837
2094838ATTTACATTTCATAATAAGTAGTTAAAACCAAAGTAATCCAAGAGAGACTGGGGCACGCAGACAT 2094902
2094903ATTTACATTTCATAATAAGTAGTTAAAACTAGTTACCATACTACCGCCAACTTTAAAAGAATA 2094965
2094966ATTTACATTTCATAATAAGTAGTTAAAACCCAAAAAATGCACAAAATAACCTAGAAGTTAAAACC 2095030
2095031ATTTACATTTCATAATAAGTAGTTAAAACACCGGAAAACAAATTTAGGCTTGATTTCTTTACTTTC 2095096
2095097ATTTACATTTCATAATAAGTAGTTAAAACATGAAGATGATTTCAAACTAGCTACAGATAAAGATA 2095161
2095162ATTTACATTTCATAATAAGTAGTTAAAACTCACTGTCTTTCACTTTAAAAGTTGCTCCAGAAAG 2095225
2095226ATTTACATTTCATAATAAGTAGTTAAAACGCCATCCAAAAACACTCCTTATCCTTAATTTATA 2095288
2095289ATTTACATTTCATAATAAGTAGTTAAAACAGTTTTAAATTTAGAACGACGGAAGACGGCGTTTCC 2095353
2095354ATTTACATTTCATAATAAGTAGTTAAAACAACTTGATGTTGCTAGTTTACCTGATGATCAATTTT 2095418
2095419ATTTACATTTCATAATAAGTAGTTAAAACGTAGAAATTTTCGATACGGATTTCGATACACTAATGTA 2095485
2095486ATTTACATTTCATAATAAGTAGTTAAAACCTTTGGCAGAGGAAGTTGGTCATCATCATTTGACTGT 2095551
2095552ATTTACATTTCATAATAAGTAGTTAAAACGATAATTAAGTAAGTCGCCTGCAGTTTCCGGTCCAAT 2095617
2095618ATTTACATTTCATAATAAGTAGTTAAAACTATCACGGAAGTGCAAGAGTCGGAGAGTTCTGTAGAT 2095683
2095684ATTTACATTTCATAATAAGTAGTTAAAACTGCGCAGGGTGATGCTAGTCTTGTAGGTGCTAAGTA 2095748
2095749ATTTACATTTCATAATAAGTAGTTAAAACGACAACCCCACTTTAACCAAAAGCAGGCTAAAAGAC 2095813
2095814ATTTACATTTCATAATAAGTAGTTAAAACATGAAATCTTAAAAAAGAGAAAGAACAGCAAGAAGCA 2095879
2095880ATTTACATTTCATAATAAGTAGTTAAAACTAATGTCATATAGTATCATATCAATAAAAAGCGTTG 2095944
2095945ATTTACATTTCATAATAAGTAGTTAAAACGGGGCTAACGCGCTTAATTGTTCGCGACTAGCTT 2096007
2096008ATTTACATTTCATAATAAGTAGTTAAAACATACATGCAGTTTATTATTCGTTTTATTCAACCGT 2096071
2096072ATTTACATTTCATAATAAGTAGTTAAAACATGAAACGTCCGAAGCTAGTAGGACATGAATTGGTGA 2096137
2096138ATTTACATTTCATAATAAGTAGTTAAAACGGGGAACCATTTTGCAAAGCTCATTATAAGAATACA 2096202
2096203ATTTACATTTCATAATAAGTAGTTAAAACAAAAAAGAAGGCTGGCGCGCACGTTTTCCAAACAA 2096266
2096267ATTTACATTTCATAATAAGTAGTTAAAACAAGTTAAAAGTGTCTAAAGAAAAAGCCAAAAAAA 2096329
2096330ATTTACATTTCATAATAAGTAGTTAAAAC2096358
Left flanking sequence : Till position 2094578 (length bp)
GGCGTTGGTTGCGGTTTTGTTGGTTTAGAGGAGTGTAGGAAAAGGCTTGGATTTAGGTCCTGGCCTTTTT
TATTTTTGGGGTTTAAATTATAAGAGGAAG
Right flanking sequence : From position 2096358 (length bp)
CCGCTCTATTTTCTGCCTACTCCCATCATAACTCAGGGTACTATATTTGTCGACCTCTTAAAAATCGGGT
GAAAATCATAACTTATCCCTTCGGATTTTT
Print the CRISPR sequence : From position bp To position bp