CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011978_8
Flanking alignement tool
Page manual
  
Home Page
NC_011978_8                                                                                                                 
top
Strain :
Thermotoga neapolitana DSM 4359
RefSeq :
NC_011978 (chromosome circular)
CRISPR id :
NC_011978_8
DR consensus (30 bp) :
GTTTCAATACTTCCTTTGAGGTATGGAAAC
Number of repetitions :
6
Begin Position :
1152061
End Position :
1152421
1152061
GTTTCAATACTTCCTTTGAGGTATGGAAAC
GAGAATCAGATATACCCTGTGAAGGCATATGTGAGC
1152126
1152127
GTTTCAATACTTCCTTTGAGGTATGGAAAC
CTCCTATTCTTGAGGCAAACCTGAGCCTTGCATCTAC
1152193
1152194
GTTTCAATACTTCCTTTGAGGTATGGAAAC
TATGAGCCCGATTATGACATCTCGGGCATAACGTAA
1152259
1152260
GTTTCAATACTTCCTTTGAGGTATGGAAAC
TTTCGATCCCGGTCAATCTTGTCAACAGCTCCGCCG
1152325
1152326
GTTTCAATACTTCCTTTGAGGTATGGAAAC
CGGGAGACAAGGAGCACAAGAAAATCTCGTATCTTG
1152391
1152392
GTTTCAATACTTCCTTAGAGGTATGGAAAC
1152421
Left flanking sequence : Till position 1152061 (length
bp)
TGTGTGTTAGAATCACCTGTGATGAAATATCCTCTGTATGTTCCCATATACTCTTGCTTTTTGATATGCT
TTGTGGTATAATTTCCTTGAAATCCATCGG
Right flanking sequence : From position 1152421 (length
bp)
GAAGTATGAAAACCACCCAAAAACAAAAAAGGCGGGGAAATCCCCGCCTCTGTTTATTCTGAAAGATCGT
TTTCAACTTATCCTTGCCCTTTCGAAACTC
Print the CRISPR sequence : From position
bp To position
bp