Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_012125_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 RefSeq :NC_012125 (chromosome circular)
CRISPR id : NC_012125_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :10
Begin Position : 3028681 End Position : 3029258

3028681ACGGCTATCCTTGTTGGCGCGGGGAACACGGCTACACGCAAAAATTCCAGTCGTTGGCGCA 3028741
3028742CGGTTTATCCCCGCTGGCGCGGGGAACACCCGATTAAGATCCGCAGTCTGCATCAGTAACT 3028802
3028803CGGTTTATCCCCGCTGGCGAGGGGAACACTTCCCCTCCGGATGGCGGGGATGCTCTTATGG 3028863
3028864CAGTTTATCCCCGCTGGCGCGGGGAACACTATGCCGCCCCGGCGTACAGCGACAGGCGGGC 3028924
3028925CGGTTTATCCCCGCTGGTGCGGGGAACACGGCCGTCTGCATTGAGCGCAGTTTTAACGCGT 3028985
3028986CGGTTTATCCCCGCTGGCGCGGGGAACACTGCGCCACGCCTATACCATCCGAGTTTTGAGC 3029046
3029047CGGTTTATCCCCGCTGGCGCGGGGAACACTCTTCCGGTGGGTTTTCTTGTCCGTCGATGGC 3029107
3029108CGGTTTATCCCCGCTGGCGCGGGGAACACATCTAACCGGCTGCAATGCTCAGGCATTACAG 3029168
3029169CGGTTTATCCCCGCTGGCGCGGGGAACACGGTGTGCCAATGGACAATACAAAGCATTTTCG 3029229
3029230CGGTTTATCCCCGCTGGCGCGGGGAACAC3029258
Left flanking sequence : Till position 3028681 (length bp)
GTTCATCAGGCGTTTTACAGACAAAAAACTGTCAACCTATATCAGGACTAGTCAACAGGTTTGTAGCAGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3029258 (length bp)
ACTAAATGTATGTCATTGTTTATAAACTACTTTTTATCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT

Print the CRISPR sequence : From position bp To position bp