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CRISPRs details
NC_012632_2
Flanking alignement tool
Page manual
  
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NC_012632_2                                                                                                                 
top
Strain :
Sulfolobus islandicus M.16.27
RefSeq :
NC_012632 (chromosome circular)
CRISPR id :
NC_012632_2
DR consensus (24 bp) :
CTTTCAATTCTATAGTAGATTATC
Number of repetitions :
99
Begin Position :
935642
End Position :
941865
935642
CTTTCAATTCTATAGAAGATTATC
TATAGATTCTAAGCTCATAGTACTAAGCGGCAGACTTC
935703
935704
CTTTCAATTCTACAGTAGATTATC
AGTGTCTTTTGATAAAGTGTAACTTTCTCTTAATAGAAA
935766
935767
CTTTCAATTCTATAGTAGATTATC
CGTCTGAGGACGGATCCTACGGCGAAGCAGTACTGGAGTT
935830
935831
CTTTCAATTCTATAGTAGATTATC
CGGTTTCGGTGGATTTATATATAGCCACGAGAAGGATGA
935893
935894
CTTTCAATTCTATAGTAGATTATC
GTAAACACGACCTCCACTACTACACTATAAATTACATTGCT
935958
935959
CTTTCAATTCTATAGTAGATTATC
AGTAAGCAGTGGTTATAAAGATACTGATGAACTAATAGGG
936022
936023
CTTTCAATTCTATAGTAGATTATC
TTGATATCGATTATGTTATTTATATTAATGTTAAAAAG
936084
936085
CTTTCAATTCTATAGTAGATTATC
CTTGTTTATTATTGAGTTGTTTCAAGATGTTGGTATCAT
936147
936148
CTTTCAATTCTATAGTAGATTATC
TTTGCATATCTACTGACGTCAGCGATGTATCTAAGGTTA
936210
936211
CTTTCAATTCTATAGTAGATTATC
CTTACACTCAACTTAAAAGAAGAAGAGATAATAGCAAA
936272
936273
CTTTCAATTCTATAGTAGATTATC
CCGAGGCATCATTGATATCTAGGGCGGGCGTTAAATTCGTAG
936338
936339
CTTTCAATTCTATAGTAGATTATC
AGGATTATCTCTTCGTCTACGGTGCTCGCGTCCACGATCTT
936403
936404
CTTTCAATTCTATAGTAGATTATC
ACGCGGATTAATAGATTCTGCATATGCGACGTTAGAACAAG
936468
936469
CTTTCAATTCTATAGTAGATTATC
CTTTGTTCTCTCAGAAGCTGTTACGTTACTTCTTAGTAT
936531
936532
CTTTCAATTCTATAGTAGATTATC
ATTATAAAAAAGATAAACGATTAAGCATTCAATTTGAAG
936594
936595
CTTTCAATTCTATAGTAGATTATC
AAATAAATTGAATTTTGACTTACAAGTTTTTCCTCTTCT
936657
936658
CTTTCAATTCTATAGTAGATTATC
CATCAGATTTAGCTAATATTAACATTCTTCTAGGGGGATA
936721
936722
CTTTCAATTCTATAGTAGATTATC
GCCGGATTTTTTTCATATTTCAAGAAAAAAGAATGCGAT
936784
936785
CTTTCAATTCTATAGTAGATTATC
AATTTTATATCGAATCTGATTTTTATTTCAATAATTT
936845
936846
CTTTCAATTCTATAGTAGATTATC
CCCGACACTTGAATAATAAGGACTAAATAATTAATTAA
936907
936908
CTTTCAATTCTATAGTAGATTATC
TGAGGAAGAATGATAACACTTTTTGAAGTGTTTCTTAT
936969
936970
CTTTCAATTCTATAGTAGATTATC
AATTTCTTGACCGCCGTATGTGACTTTTTCGGGTTCTAT
937032
937033
CTTTCAATTCTATAGTAGATTATC
GCAAAACGATAAACATAATAGTTCCTTCCGGAGCTAGCGGT
937097
937098
CTTTCAATTCTATAGTAGATTATC
CGCCTTCTGCACGAGCGTTGGAGCGAACAAACCGTAGA
937159
937160
CTTTCAATTCTATAGTAGATTATC
TTGTATCACGAACTGTGGGTTGCCACCCTGAACGATTAT
937222
937223
CTTTCAATTCTATAGTAGATTATC
AGAATCACCCCGAGCTATTAAAGCCAAACGGCGAAATCGCA
937287
937288
CTTTCAATTCTATAGTAGATTATC
GGAAACTCCCACTTCAAGCGTAAACGTTTGCCAGGGCTT
937350
937351
CTTTCAATTCTATAGTAGATTATC
TACTTTATTTGTGATAGATGAGGCTCATCATCATTTTCAA
937414
937415
CTTTCAATTCTATAGTAGATTATC
ATCCTTATATAATGATATAATAACGCTAGGGTGAGATGA
937477
937478
CTTTCAATTCTATAGTAGATTATC
CTTTAATATTGCGGCAAGTGCTCCAGCTGGTTCTGTTGT
937540
937541
CTTTCAATTCTATAGTAGATTATC
GAACTAGAGGACTTCTTCCTAAGTGGTCTCGATGAAAC
937602
937603
CTTTCAATTCTATAGTAGATTATC
AATAATAAACATTCTAGTGATGATATCATTTTACCAATGG
937666
937667
CTTTCAATTCTATAGTAGATTATC
AATTACTACTCAAGATATAATAGACTTTCTGACTACAAT
937729
937730
CTTTCAATTCTATAGTAGATTATC
TCATGAAATTTATTATTAACAACAAGATATAATTATTTA
937792
937793
CTTTCAATTCTATAGTAGATTATC
TAGGGTTCTTCTTCAATTGGGTGAGGGAAGAGAGGATATG
937856
937857
CTTTCAATTCTATAGTAGATTATC
ATAGAGCAAACGCTAGATTGTCGAGAAAGATGTTTATCGTG
937921
937922
CTTTCAATTCTATAGTAGATTATC
CCTCAACTGTTTGAATATCCATAATTAAGTATAATGA
937982
937983
CTTTCAATTCTATAGTAGATTATC
ATACTAACTATGGGGCAAACCACCAAGTCTTGCAAGTAAT
938046
938047
CTTTCAATTCTATAGTAGATTATC
TTCAACATTCCCAATTCTCATAAGTTCATTATAGTTTCC
938109
938110
CTTTCAATTCTATAGTAGATTATC
TTGATTTTGGGTTGCGGACATGGGATGACCCCGATAAA
938171
938172
CTTTCAATTCTATAGTAGATTATC
CGGCATCCCTGAAACATGCATACTGTATTGTTGAAAGATAA
938236
938237
CTTTCAATTCTATAGTAGATTATC
ACAAAAGAAAGAAGAGGAATTCAGTTTAGGGCTTATAGGTTT
938302
938303
CTTTCAATTCTATAGTAGATTATC
CCACTTCTTGATCCTGAAAACGATACGCATCACTGTAAA
938365
938366
CTTTCAATTCTATAGTAGATTATC
AATATGTGGTTGAAACAGTTTCGTCGTTCTTCAACGAAGAG
938430
938431
CTTTCAATTCTATAGTAGATTATC
AACAAGACCTCGACGTCCCGTGAGTCCAGGAAGAGGAT
938492
938493
CTTTCAATTCTATAGTAGATTATC
ATTAATACTCAAGATATAATAGATTTCTTGACTAAAAT
938554
938555
CTTTCAATTCTATAGTAGATTATC
GAAACTTTAAAAGTCTGCCAGACAAATGTTTAAATATAG
938617
938618
CTTTCAATTCTATAGTAGATTATC
TTAGAGACAAATGTCACTTCCATAGACTTATAATAGTTTAA
938682
938683
CTTTCAATTCTATAGTAGATTATC
AAAACTTCTATTGAATTTTACTAGATGGTCTTTTTAT
938743
938744
CTTTCAATTCTATAGTAGATTATC
TTGTCAATAATTTAGTAGTACCAGTAGCTAAAAGATA
938804
938805
CTTTCAATTCTATAGTAGATTATC
AATTAATAAATTATTATTCAGCAGGTCAAAGAATAAGGATT
938869
938870
CTTTCAATTCTATAGTAGATTATC
ACCTGCAGAACTCATTATCCATCATGTAAGAAGTACGAG
938932
938933
CTTTCAATTCTATAGTAGATTATC
ACGCCAATTGACCACAGTGGTCTACTTATTGATGAAGTATT
938997
938998
CTTTCAATTCTATAGTAGATTATC
TCTTTTTTCTTCGTTTCTGTTTCACTTCTATATTTAATCC
939061
939062
CTTTCAATTCTATAGTAGATTATC
CCTTACACGTTCAAACCTAATCATCTCGTTACATTACT
939123
939124
CTTTCAATTCTATAGTAGATTATC
CATATAATGTTGTTCCTAGTAGATACCCTAATATAACAC
939186
939187
CTTTCAATTCTATAGTAGATTATC
ATAAGGTACTTTACATAGATATAGAAGTTAATAATATAGA
939250
939251
CTTTCAATTCTATAGTAGATTATC
ATTGTAGTCACTACTTTAGCACCGCTAAGAATATATTTA
939313
939314
CTTTCAATTCTATAGTAGATTATC
GAGGAAGAGATGGAGTCTGGTAAGGAGGTTTTCGTTATTTA
939378
939379
CTTTCAATTCTATAGTAGATTATC
AGAAAAGTATTCTATCTTTATCCGGATAATACAGAGTA
939440
939441
CTTTCAATTCTATAGTAGATTATC
CTTTTCTACACAAGAGAGCCGAGAGAAATAGAATTCATT
939503
939504
CTTTCAATTCTATAGTAGATTATC
TAACCACTTAACTCCCCAGTTAAGTGGTTGGAGACTAG
939565
939566
CTTTCAATTCTATAGTAGATTATC
ACTTCGCTCCGCTTTGGGGCGACGAGGACGAGTTCTACAG
939629
939630
CTTTCAATTCTATAGTAGATTATC
TATTAGGAAAGTAAACATCTTCGTTTCCTGATATGATTAC
939693
939694
CTTTCAATTCTATAGTAGATTATC
AGGGGATGTAGGAGGAGGATTTGCGAATGATTTTAGAAGAAT
939759
939760
CTTTCAATTCTATAGTAGATTATC
AAATATTTATAAGGAACAAAAAACATAGAGAAGTACAGT
939822
939823
CTTTCAATTCTATAGTAGATTATC
TTAAATATGATTATGAGGGAACAATAAAGATAATTTATTA
939886
939887
CTTTCAATTCTATAGTAGATTATC
ATATAATACCATCTATAAATAAAGATAAGAAACTTGTGA
939949
939950
CTTTCAATTCTATAGTAGATTATC
CCGCAAATACCTTACTTCATCACTATTGTAAACCCAC
940010
940011
CTTTCAATTCTATAGTAGATTATC
TTAAGTATATTAAGTATCAAAGGGGAAGAAAAAGTAAGG
940073
940074
CTTTCAATTCTATAGTAGATTATC
GGTAAACAGTGGTTATAAAGATACTGATGAATTAATAGGAA
940138
940139
CTTTCAATTCTATAGTAGATTATC
CCCCTTCTTAATTTTCTTATTAAAAATGATATTGAATACG
940202
940203
CTTTCAATTCTATAGTAGATTATC
TTTATATCACAAAGATGTATTGAGGGAGTTCCAAAGGA
940264
940265
CTTTCAATTCTATAGTAGATTATC
TGGAAAGAAGTAACCTAGGAAATGTGTACATTACAATA
940326
940327
CTTTCAATTCTATAGTAGATTATC
TGGTGTCCCCAATAACACTTGCTTACCGAAGATAAAGG
940388
940389
CTTTCAATTCTATAGTAGATTATC
ACTAGAGCTTTACTGTTGCAAGAAGCACTACAAAATTT
940450
940451
CTTTCAATTCTATAGTAGATTATC
CCATTTGCGTCTAGTAATGTAATAATTCGTGGGTTAATTCA
940515
940516
CTTTCAATTCTATAGTAGATTATC
ATCTACAATTAAGGACAAATCACGAACGAATAATTGTAA
940578
940579
CTTTCAATTCTATAGTAGATTATC
TAAATTTATCGCCAAAATCCTCCACGTTGAATATATAGAGAA
940644
940645
CTTTCAATTCTATAGTAGATTATC
TCCCTCACAGATCTCTATTGAGAATTTCCAACCTTTAG
940706
940707
CTTTCAATTCTATAGTAGATTATC
GTCGTGAAGGTCGAGAAGGGCAAAAACGTCGTCGAGGTGG
940770
940771
CTTTCAATTCTATAGTAGATTATC
TTTATACGCCAATACGCCCCACTCCTTCTAATGTCGTG
940832
940833
CTTTCAATTCTATAGTAGATTATC
AAAGATAACCAAGCCCTAGTTAATGAAAACGGAAAAATCA
940896
940897
CTTTCAATTCTATAGTAGATTATC
ATTCATTAAAAATGCACCTACATATCATGATCCAGG
940956
940957
CTTTCAATTCTATAGTAGATTATC
GCTGTTGTAGCTAACATCGCTAGGTTTTGAGGAGATAGGA
941020
941021
CTTTCAATTCTATAGTAGATTATC
ACTACCTTCCGGTGAGAACGAGCCACCTGTTCAATACCT
941083
941084
CTTTCAATTCTATAGTAGATTATC
TAAAGGTGAAAGGAGAAGTATACAAGTTGAGTTACCAAA
941146
941147
CTTTCAATTCTATAGTAGATTATC
AAGGGGGAGGTATTTACTCCGGCCTTAGCGAAATATCTAA
941210
941211
CTTTCAATTCTATAGTAGATTATC
TTGTCTCTTCTTCTAATAAGTCCATGCCCTCTGCATCAGA
941274
941275
CTTTCAATTCTATAGTAGATTATC
TAGTAGAAGGCGTAATGGAGACCATGCCGAATATTGAAAT
941338
941339
CTTTCAATTCTATAGTAGATTATC
CCGCCATGTGTTTACTGGTACAAGTAAAAGAAGGAAAG
941400
941401
CTTTCAATTCTATAGTAGATTATC
AGCTTACAATCTCAAAGATAATCGCTGAAAGGGAGGGAA
941463
941464
CTTTCAATTCTATAGTAGATTATC
AGCCACGGGATAGACAGGTTGCCGGAAGAGACGTTAAG
941525
941526
CTTTCAATTCTATAGTAGATTATC
TGAATGCAACAGTAAAGGTTAAATTTGCAACAGTGTAAAAGT
941591
941592
CTTTCAATTCTATAGTAGATTATC
TGATAGTTGATGCAGAAAAGATATATAAATATATTATTA
941654
941655
CTTTCAATTCTATAGTAGATTATC
TTTCACTATAGTTATCTTGACCCTTATGGCGGGGTTGTT
941717
941718
CTTTCAATTCTATAGTAGATTATC
CATGAAATATCTCGAAGCGGGGAAGATAAATTTCTACA
941779
941780
CTTTCAATTCTATAGTAGATTATC
GTGTAGCGTCACTTGAGAACCTGCACGGTGAAGCTAGG
941841
941842
CTTTCAATTCTATAGTAGATTATC
941865
Left flanking sequence : Till position 935642 (length
bp)
TCTTATTCGATATAAACGTACTTATATCTATTAGGACTTCGTCTTTTTCCATACGGCTTCCCTAGATTTA
GATTTCAAACAAGTCATAGAATATAGTATA
Right flanking sequence : From position 941865 (length
bp)
CTGAGGGTTTATTAACTTTTATCTAATATCTTGTTCTCTCTTCGTTATTTATAAGCTTTACTCTGTATTA
TCTTTTCAATTTTTCTCCTCATCCTTTCAC
Print the CRISPR sequence : From position
bp To position
bp