CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_012804_2
Flanking alignement tool
Page manual
  
Home Page
NC_012804_2                                                                                                                 
top
Strain :
Thermococcus gammatolerans EJ3
RefSeq :
NC_012804 (chromosome circular)
CRISPR id :
NC_012804_2
DR consensus (30 bp) :
GTTGCAATAAGACTCTAGGAGAATTGAAAG
Number of repetitions :
22
Begin Position :
1221278
End Position :
1222718
1221278
GTTGCAATAAGACTCTAGGAGAATTGAAAG
GGAGATTGGTCAACTCTGGCTTGACTGGAGGGCTGGT
1221344
1221345
GTTGCAATAAGACTCTAGGAGAATTGAAAG
CGCGTAAATGAGGGCCGGGTAATTCGCGAGATAAGC
1221410
1221411
GTTGCAATAAGACTCTAGGAGAATTGAAAG
ATACTCAAAGCCGGCCCCAACAGCCCCAAAATAATCA
1221477
1221478
GTTGCAATAAGACTCTAGGAGAATTGAAAG
CTGGATCTCCCACACGGCCTGGGCCTTCTCAACCTGC
1221544
1221545
GTTGCAATAAGACTCTAGGAGAATTGAAAG
TAGTTCTTAACGAAACTCCGCACCCTCCTCCTAACTC
1221611
1221612
GTTGCAATAAGACTCTAGGAGAATTGAAAG
TTGGGGTGCTCTACCTCGCTAGGACTGGCAAAAAGAGG
1221679
1221680
GTTGCAATAAGACTCTAGGAGAATTGAAAG
CTCATTGAATCCCTCTCAACCTCAAGGTACTCCTTCG
1221746
1221747
GTTGCAATAAGACTCTAGGAGAATTGAAAG
GACTTTGGTCGGGGCCCGCAAAGAGTATCCGAACCTCTCAA
1221817
1221818
GTTGCAATAAGACTCTAGGAGAATTGAAAG
TTAAGTGTTCATGAATTGATACTGGAAGTCGAAACAC
1221884
1221885
GTTGCAATAAGACTCTAGGAGAATTGAAAG
AAGCGTTGTTATTTGCCTCATGCCGATCCCCCCAT
1221949
1221950
GTTGCAATAAGACTCTAGGAGAATTGAAAG
TTTGTCGGGGACTACTTCGTAATGGCACACAACGGCT
1222016
1222017
GTTGCAATAAGACTCTAGGAGAATTGAAAG
AACTCGTAACTGAAGATGTTATAGTTGCTTCTATCGT
1222083
1222084
GTTGCAATAAGACTCTAGGAGAATTGAAAG
GAGTTGGTCGTGTGGGTTGGGGTTATCAGTGCATGCTT
1222151
1222152
GTTGCAATAAGACTCTAGGAGAATTGAAAG
TTCTTCTATGACGTATTTATTGATTTTACTGATTATTG
1222219
1222220
GTTGCAATAAGACTCTAGGAGAATTGAAAG
GAGCGAGGTTGGGCATCTCCTCAGCGACGGGAGTGG
1222285
1222286
GTTGCAATAAGACTCTAGGAGAATTGAAAG
AAGAGTGCACAAAAGAATACATTTCAACTAAAGAAC
1222351
1222352
GTTGCAATAAGACTCTAGGAGAATTGAAAG
AACAAAAAACGTGTTTGACTTCCCGGCCTTTACTTTT
1222418
1222419
GTTGCAATAAGACTCTAGGAGAATTGAAAG
CCTAATGGCCCCGGTGGTCGGGGCCGCCGACCAAAGCA
1222486
1222487
GTTGCAATAAGACTCTAGGAGAATTGAAAG
ACGGGAGCACGGCGGAGATCGAGTACACGGTCAAGG
1222552
1222553
GTTGCAATAAGACTCTAGGAGAATTGAAAG
GGTTGAACGTCACGAACTGGCTCAGGCCTTCGTACAG
1222619
1222620
GTTGCAATAAGACTCTAGGAGAATTGAAAG
CGGAACAATAATCGGCGAAAAACCACTTTATCTTATCGA
1222688
1222689
GTTGCAATAAGACTCAAAAAGAATCGAAAG
1222718
Left flanking sequence : Till position 1221278 (length
bp)
GAGGGGATCTGTGCCTTCTTTTCCAGAAGGTTTCCAGAAAAGCTTAAATATATGAGAACGTACAACCCCC
TGTTGGGCAAACGGACGGAAAATCCGCCCT
Right flanking sequence : From position 1222718 (length
bp)
AATTCCTCTCCGGACATCTTTTAGATAAGATCACGGTCGAAAACCCCCGCAGATCTCAACTTTCCCCCTA
CCTATTGGAATATTTCTCCAAGGACGGGCT
Print the CRISPR sequence : From position
bp To position
bp