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CRISPRs details
NC_013160_1
Flanking alignement tool
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NC_013160_1                                                                                                                 
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Strain :
Cyanothece sp. PCC 8802
RefSeq :
NC_013160 (plasmid pP880201 )
CRISPR id :
NC_013160_1
DR consensus (37 bp) :
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
Number of repetitions :
8
Begin Position :
45215
End Position :
45763
45215
TAAACTCCAGCTCATAGGGATTAACAATAATTGGAAC
TTCTTAATCATTTTACGGGTTCTATTGCTAATGCTAG
45288
45289
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
CATGGCGTTTTCGAGGAGTGTTGCTGCGATCGCGTTTTTC
45365
45366
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
GCTAAAATTTCTTGCTCTTTTTTCTCCTCAGAG
45435
45436
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
CCCTAAGCAACCCGCTAACCCTCAAGTGGTTTTCCG
45508
45509
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
ATCGACTCATCCCTTTTTTTTCTAAAACTTTTTTT
45580
45581
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
AATGATTGTATAAACGATAGAATTTCCCTGAATTTCTT
45655
45656
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
TCGTATAGCTTGATTTCCCAAGGAATCGTTAAAT
45726
45727
GTTTCAATCCCTCATAGGGATTAACAATAATTGGAAC
45763
Left flanking sequence : Till position 45215 (length
bp)
CCTGAGAAAAAACCTAAAACTAAGAAGACTTAGCTTAACTTTTGAGTCAATTGACTAACATTTTAGCCCA
AAAAGAAGACTGGGCTATTTTAAAGTAGTC
Right flanking sequence : From position 45763 (length
bp)
GGCGGGACTCGAAAAGCTATACAGTATGGGGTTTTCAAGGTTCGTTTGCGCCGCAGCCATTAAAGATTGG
ATTTGGCTTACCATCATAATAACACAAAAT
Print the CRISPR sequence : From position
bp To position
bp