Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013407_8                                                                                                                 top


Strain : Methanocaldococcus vulcanius M7 RefSeq :NC_013407 (chromosome circular)
CRISPR id : NC_013407_8
DR consensus (30 bp) : ATTAAAATCAGCACGGATCGTGATGGAAACNumber of repetitions :7
Begin Position : 590203 End Position : 590633

590203ATTAAAATCAGCACGGATCGTGATGGAAACCGGACACACAACCAACGGCGGGTTCGGAGTAGGCGGATA 590271
590272ATTAAAATCAGCACGGATCGTGATGGAAACCAGGATAACCTCATTGAGGGACCCCTTGGGTGTGATGT 590339
590340ATTAAAATCAGCACGGATCGTGATGGAAACCTAAATAATTATATTTATTTATTCGAGAGATCTTCT 590405
590406ATTAAAATCAGCACGGATCGTGATGGAAACTGATTCTTGTTGTTACTTCACCATACAACTCTTTTA 590471
590472ATTAAAATCAGCACGGATCGTGATGGAAACAATCATTTATTTAAAAACATAAAAAATTATATAAAAA 590538
590539ATTAAAATCAGCACGGATCGTGATGGAAACTGTTTTAGAAATGCTTCTTTTGCTTCTAACCTGCA 590603
590604ATTAAAATCAGCACGGATCGTGATAAAAAA590633
Left flanking sequence : Till position 590203 (length bp)
TTTATAAAGAAAAGGGGTTATTTATGGGTAGAAATTTTATAGTGTAGAAAAATATAAATATTAGTAAAAA
CATTAATAATAAAATAAAAAAAATTATCCT
Right flanking sequence : From position 590633 (length bp)
AGGATATTAAAATCATTTTTTAGATGTTGATCAACTCTAAAAGAGAGAACTCAATTAACGTTAGCATATC
AATAGGGCAGAGTCATATAGAACTCAGACC
Print the CRISPR sequence : From position bp To position bp