CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_013502_1
Flanking alignement tool
Page manual
  
Home Page
NC_013502_1                                                                                                                 
top
Strain :
Rhodothermus marinus DSM 4252
RefSeq :
NC_013502 (plasmid pRMAR01 )
CRISPR id :
NC_013502_1
DR consensus (37 bp) :
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
Number of repetitions :
9
Begin Position :
24096
End Position :
24759
24096
GTCTTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CAGGTATTATGACGAAGACTTCGAATGTGAAGTCTACGTCT
24173
24174
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
ATCGTCCTGCAGCCGACCGAAACAGAAGTGACCCTCATCAGC
24252
24253
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TGGACAGTCATATCGAAGTCGGCCCCTACATTCTGC
24325
24326
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TTTTTCAGAGATTTTCGCCCGATTCGTTCTTATCGTTTTAT
24403
24404
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GGTCATATGCACCGTGCATATTGACCGGGCTCGGGA
24476
24477
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GGTTTTCTGGTGTTGCATGTTTCACTAAAACCAGACGGAGCCA
24556
24557
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GCGCTGGGACTAAAGGACAGGTAAATAGAGCGGGCAGCTCAA
24635
24636
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
ATGAGATCAGAGAACTAAAAAAAGTAAAGGAGGAAAACTATGCTCTACAT
24722
24723
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
24759
Left flanking sequence : Till position 24096 (length
bp)
ATTGATTCCGGCGCATTAGCTCAAAGCAGCGAAAGCGAGCTGCTGGACAAAAGCAGACACGCAGCTAAGC
GCAAGAATACTCCGCCCGCATGAAATACCC
Right flanking sequence : From position 24759 (length
bp)
CCCATTGTTACGGGGCCACTCAGAACCGGCCTTTTTGCGGCCAAACAGGCCGATTTTTTCGCGCACAGAA
CGCCAAAAAACGGAACGAAATTTGCCTTTA
Print the CRISPR sequence : From position
bp To position
bp