CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_013520_1
Flanking alignement tool
Page manual
  
Home Page
NC_013520_1                                                                                                                 
top
Strain :
Veillonella parvula DSM 2008
RefSeq :
NC_013520 (chromosome circular)
CRISPR id :
NC_013520_1
DR consensus (35 bp) :
GTTTCCGTCCCCTAATGGGGATTATTTAATTTAAC
Number of repetitions :
5
Begin Position :
2053912
End Position :
2054256
2053912
CTTTTCTGACCCCATTGGAGATTATTTAATTTAAA
ACCACGTATGCTGCAGTTGGAATTCCTAAGCGCTATTATGATAT
2053990
2053991
GTTTCCGTCCCCTAATGGGGATTATTTAATTTAAC
CGTGTACGGTAATTTATTCGATAATACAGAAGATAAGTTTGG
2054067
2054068
GTTTCCGTCCCCTAATAGGGATTATTTAATTTAAC
TGGCTAAGAAGCACGCCTTACTCGGTGCATCAAGTAGTGC
2054142
2054143
ATTTCCGTCCCCTAATGGGGATTATTTAGTTTAAC
AACAATGCTAGTCAAAAATGAAACAAAATATTGTTGGTATTTTG
2054221
2054222
GTTTCCGTTCCCATCAGGGGATTATTTAATTTAAC
2054256
Left flanking sequence : Till position 2053912 (length
bp)
TATTATTATGATGGGATTTGGATATTCAAAATGGCAACCGTAAAAAATTAATATTTATATAAAATAAGAA
AAAGCACTATCTACAAATAATAAGATAGTG
Right flanking sequence : From position 2054256 (length
bp)
TTGGTTCTATGAACCTTAGTTTTAGTGACTAACGCTATATGAAGCATCCCACCATCATAGCAACCACGAA
TAGGATCTGTATCTCCTACAGGAGTATAAA
Print the CRISPR sequence : From position
bp To position
bp