Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_013520_5                                                                                                                 top


Strain : Veillonella parvula DSM 2008 RefSeq :NC_013520 (chromosome circular)
CRISPR id : NC_013520_5
DR consensus (35 bp) : GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAAC Number of repetitions :6
Begin Position : 2079400 End Position : 2079799

2079400CTGCGCATACCGTAAACGGTAAGTGCTGTTGCAACCTCTTTATGCAAATGCATAAAGAAATTCAAAACTCCCAATA 2079475
2079476GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAACTTTAGGATTTGTAATCGGATTCGAATTATTTCTAGC 2079546
2079547GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAACCCAAAGTAATTGTCATTTTGAAGTACAGCAATAAT 2079616
2079617GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAACGAAGCTGCAGACATGGCAATAGTAGAATATTCAACCCCTTCTA 2079694
2079695GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAACTCTACATGATGCTGAAAATAAGAAAGCAGAACTAG 2079764
2079765GTTTCAATACCGTAAACGGTAAGAGCGGTTGCAAC2079799
Left flanking sequence : Till position 2079400 (length bp)
GATGAATCCCTTATCACCCTTGTTTTACCTTCACTTCGTTCAGGTACTTGAGATGTGCGGACCTCATCGT
CGCTTTGCTCCTCTGCTGTCTCGCACCCTT
Right flanking sequence : From position 2079799 (length bp)
AGCATACCTCAGAAAGCCAGTATTCATGGGGCTTAAAATTAAGTTTTGGCAAACCTCACACCGTAAACGG
TCAGATTGGGCTCCCACTGGATCAAAAATA

Print the CRISPR sequence : From position bp To position bp