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CRISPRs details
NC_013642_4
Flanking alignement tool
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NC_013642_4                                                                                                                 
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Strain :
Thermotoga naphthophila RKU-10
RefSeq :
NC_013642 (chromosome circular)
CRISPR id :
NC_013642_4
DR consensus (30 bp) :
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
Number of repetitions :
19
Begin Position :
1025628
End Position :
1026846
1025628
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
CAGTAGATGAACCACTCTTGATCCGACTTTTCCC
1025691
1025692
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ATGGACGTGTGAAAATAATTGCAGAGGCCGTAACAAA
1025758
1025759
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TACTGGAGTTCTGCTTCTCCTGTCGTACGTCCCGTTT
1025825
1025826
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TGTACTCTCCAGCGAGCATAAAAGCGAACGCGAAAG
1025891
1025892
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ACTCGATGAAGAAAAAAATGCCCCTCAAGAAAGCCAA
1025958
1025959
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TGTGATAAAGAAATTGTACGGTTCAGTAGATAAGCTG
1026025
1026026
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ATGGCTGCCTTCCCTGCCTGGTCGTTGTCGAAGGC
1026090
1026091
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
CGAACCGCTTTGTAACGTAGATGTAACTTGACATA
1026155
1026156
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ACGTTCAAATCGAAAAGAAACCCTTCCCCACCTCCT
1026221
1026222
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ACGCAAGACGACATCAGGCAGGGAACCTGCAAAGTAA
1026288
1026289
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TGCATTTTATGACTTTCGGCGAGTTCGTCCAGTTG
1026353
1026354
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TATCTCCTCCGATGGCGGGAGCTGCGGAGTCGAGGA
1026419
1026420
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
AGGAAAGTTCCTTGTATACTCAGTCGAGCACAGCCT
1026485
1026486
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TGACAGAGACATGCAAGATGAGGAGATAAACACATA
1026551
1026552
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TCGGTTTCTGGATTCATTGCCGCAGCAACCCATGTAC
1026618
1026619
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TTCCCATGTTGGTTACTACCACTAAACTCTTATCGCT
1026685
1026686
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ACTATTCACCCGAAAATCCTGACGAATGGTCTCAAC
1026751
1026752
GTTTCAATAATTCCTTAGAGGTATGGAAAC
GCTGTTTTGTAGAATGCCCGGTATAGACATCTTAA
1026816
1026817
GTTTCAATACTTCCTTAGAGGCATGGAAAT
1026846
Left flanking sequence : Till position 1025628 (length
bp)
TGTGTGTTAGAATGGTTTATGGAAAGGGAGGATATGGAAGGTCAAAAAACATCTTGCTTTCAGAGTGTGT
TTGTGGTATAATTTCTCTTGAACTCAACGG
Right flanking sequence : From position 1026846 (length
bp)
CTGATACAAAACAAAAAATGCCCCTTTCGGGGCAAATGTTTGTTTTTGTGTTTCCGCTATCCGGTTAAAT
TACTCGTACCTCAGGGCTTCTATTGGACTC
Print the CRISPR sequence : From position
bp To position
bp