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CRISPRs details
NC_013799_1
Flanking alignement tool
Page manual
  
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NC_013799_1                                                                                                                 
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Strain :
Hydrogenobacter thermophilus TK-6
RefSeq :
NC_013799 (chromosome circular)
CRISPR id :
NC_013799_1
DR consensus (30 bp) :
GTTTCAATCCCTTATAGGCACCTAATAAAC
Number of repetitions :
36
Begin Position :
1122544
End Position :
1124919
1122544
GATAAGGACCCTTATAGGCACCTAATAAAC
GTCCCCGGTGGACCAAACGCCTTTTTTACACGCATC
1122609
1122610
GTTTCAATCCCTTATAGGCACCTAATAAAC
TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
1122676
1122677
GTTTCAATCCCTTATAGGCACCTAATAAAC
CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
1122743
1122744
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
1122810
1122811
GTTTCAATCCCTTATAGGCACCTAATAAAC
TTTATGTCTGCTATTTTCTCCCTTGTTGTGGGTGCCC
1122877
1122878
GTTTCAATCCCTTATAGGCACCTAATAAAC
CGCCTCCAATAAAACAGGGTATAAATATGGGTCTCCG
1122944
1122945
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
1123011
1123012
GTTTCAATCCCTTATAGGCACCTAATAAAC
TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
1123077
1123078
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATTTAACATAGGCATAAGCGAGTAAGTGTTGATATAA
1123144
1123145
GTTTCAATCCCTTATAGGCACCTAATAAAC
TGAGATATGTAGAGCAGCTACAGGAGGCAAAGTTCA
1123210
1123211
GTTTCAATCCCTTATAGGCACCTAATAAAC
ACACCTTCCAAGAAAGGCAGTCAGCGCCTTTGAGGT
1123276
1123277
GTTTCAATCCCTTATAGGCACCTAATAAAC
GTGAAGCGCCGCCAAATGAATAGCGAGCCACATTTAA
1123343
1123344
GTTTCAATCCCTTATAGGCACCTAATAAAC
GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
1123410
1123411
GTTTCAATCCCTTATAGGCACCTAATAAAC
GCATGAGCTGCAAGGATTTTCCAGCGAGCCACATTTAG
1123478
1123479
GTTTCAATCCCTTATAGGCACCTAATAAAC
AGAGTATGTTTAGCTTTTCTTGGGTAGCCTTGACGA
1123544
1123545
GTTTCAATCCCTTATAGGCACCTAATAAAC
TTCTTTCTCGTGTTCTTTCTTATTTTCCTGATATCGC
1123611
1123612
GTTTCAATCCCTTATAGGCACCTAATAAAC
GTGCTCGGAAGACAAAGGCTCGTACAACCAAACAGC
1123677
1123678
GTTTCAATCCCTTATAGGCACCTAATAAAC
TGTTCAAAGCTTTGAGTATCAAGTTCTAATACTTTC
1123743
1123744
GTTTCAATCCCTTATAGGCACCTAATAAAC
AATACACTTTTCTTTGAGGCAGGGGGGGGATATACA
1123809
1123810
GTTTCAATCCCTTATAGGCACCTAATAAAC
TCCTGCAACACTGTCATTTGCATCCAGCGCAATCCCAG
1123877
1123878
GTTTCAATCCCTTATAGGCACCTAATAAAC
TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
1123945
1123946
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
1124015
1124016
GTTTCAATCCCTTATAGGCACCTAATAAAC
TCTTCACATTTTCAAAGAGTTTGGAATACCTACAGGGA
1124083
1124084
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATACACACAGAAGAGGTAATTTTAAAGACTTTGCAAGCCT
1124153
1124154
GTTTCAATCCCTTATAGGCACCTAATAAAC
CAAATCCTTGAGAGGCAACCAAAAGAGATGTGGAACA
1124220
1124221
GTTTCAATCCCTTATAGGCACCTAATAAAC
ACTCCTTATTGATCATAGCGTTTTTGATGATATATGC
1124287
1124288
GTTTCAATCCCTTATAGGCACCTAATAAAC
CATAGGCATTGACGAAGGGGATATCTACTTTACCGCC
1124354
1124355
GTTTCAATCCCTTATAGGCACCTAATAAAC
ATGAATATCTTTTTTTGTTTTTCGTAGGCGTGGTAGA
1124421
1124422
GTTTCAATCCCTTATAGGCACCTAATAAAC
ACAGAAGAAAACAGCTCGCCTTCTATCCAAACTTTCC
1124488
1124489
GTTTCAATCCCTTATAGGCACCTAATAAAC
GGGTATACTTGAGAGAGAAATTTCAGGACCAAAAATC
1124555
1124556
GTTTCAATCCCTTATAGGCACCTAATAAAC
CCCGGGGGTTTAAAGGGGACCTTCACTTATATATACA
1124622
1124623
GTTTCAATCCCTTATAGGCACCTAATAAAC
TATTCCACCCTTTTCCCTTTTGCCCTGCTGTTCTTCA
1124689
1124690
GTTTCAATCCCTTATAGGCACCTAATAAAC
AAGAATTATGCATTTTTCCAGTTTTTGGAATTTTGCA
1124756
1124757
GTTTCAATCCCTTATAGGCACCTAATAAAC
GTTCTTGGTGGAGAGCGGGATGATAACGGGAACTGGA
1124823
1124824
GTTTCAATCCCTTATAGGCACCTAATAAAC
TTCCGGAAGCAAGCGAGGAACTTATTGACGGATTAA
1124889
1124890
GTTTCAATCCCTTATAGGCACCTAATAAAC
1124919
Left flanking sequence : Till position 1122544 (length
bp)
TATTCACCTAACTGCTTTTTACTCATCCTTAATTCTTGACATATATTGTAGCTTATACTATGTTCGGTAA
AAAGGAGGAAGCGAGGATCAGCAATCAGGA
Right flanking sequence : From position 1124919 (length
bp)
TTGTTAGGAACAAACCCATATTCAGTTGTCAAAAAGCTTTTGGTGTAGTAAGCTTGCATGTGTATTATAA
ACCCTAGTGGCAAGTTAGTCAAGTGGGGTT
Print the CRISPR sequence : From position
bp To position
bp