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CRISPRs details
NC_013887_17
Flanking alignement tool
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NC_013887_17                                                                                                                 
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Strain :
Methanocaldococcus sp. FS406-22
RefSeq :
NC_013887 (chromosome circular)
CRISPR id :
NC_013887_17
DR consensus (30 bp) :
GTTAAAATAAGACCGATTCGGTATGGAAAC
Number of repetitions :
18
Begin Position :
1194903
End Position :
1196104
1194903
GTTAAAATCAGACCGATTCGGTATGGAAAC
GACTTAAACTTATTGCAAGTAATATAATCTTTTAAAAT
1194970
1194971
GTTAAAATCAGACCGATTCGGTATGGAAAC
CTGTTGGAGAAGGAACATCCTCAGGATTTAAAG
1195033
1195034
GTTAAAATCAGACCGATTCGGTATGGAAAC
CTTTATTCTGGAGGGCTACTTGAAACAGTAGATAGT
1195099
1195100
GTTAAAATCAGACCGATTCGGTATGGAAAC
ATATTAAACCGAAATAAGCACAGTCCATATGTATTTT
1195166
1195167
GTTAAAATCAGACCGATTCGGTATGGAAAC
TTGACTTTGAATCTAACGATTGTTATCGGTACACGTATT
1195235
1195236
GTTAAAATCAGACCGATTCGGTATGGAAAC
TCAGTAGATTTAAATGCGTTCTTCGACATTTCAGGAGCTAA
1195306
1195307
GTTAAAATCAGACCGATTCGGTATGGAAAC
TTAATTTGGACTGTTATTGCAGTTGGCAAGGTTACATTAT
1195376
1195377
GTTAAAATCAGACCGATTCGGTATGGAAAC
CTAAATAAACAGGTTCAGAAGATACGGGCGTATTGTTT
1195444
1195445
GTTAAAATCAGACCGATTCGGTATGGAAAC
GTTGGAATCTAAAAAACTTATCAGAGTGTCCAAAACGTTTGG
1195516
1195517
GTTAAAATCAGACCGATTCGGTATGGAAAC
CTGTGCTACATTTCTGTCAATCCAATATGCTGGTGGCAAACAGATG
1195592
1195593
GTTAAAATCAGACCGATTCGGTATGGAAAC
AAATCAGCAAGGATTATTGCCCAATGGTTTGCCTGGAA
1195660
1195661
GTTAAAATCAGACCGATTCGGTATGGAAAC
TCCAACACTGTATTCTCACTGTAAGATATGTCGACATC
1195728
1195729
GTTAAAATCAGACCGATTCGGTATGGAAAC
ATTAATCAAGTTAATCTTGCTCTGATTCGTGAATTTATAGC
1195799
1195800
GTTAAAATCAGACCGATTCGGTATGGAAAC
TTCGTTTCAGACCACATTATCCACGACCCTGACAGCTA
1195867
1195868
GTTAAAATAAGACCGATTCGGTATGGAAAC
TTGGATGTTGCACAATTAAACTTTAACGCTTATTTGCAGT
1195937
1195938
GTTAAAATAAGACCGATTCGGTATGGAAAC
ATTACAAAGATTGATAATATAATTCGCTCAAAAGTTCCA
1196006
1196007
GTTAAAATAAGACCGATTCGGTATGGAAAC
GAGATGGAAATGTTAGAGAGGTTTTATGATAAGCCAGT
1196074
1196075
GTTAAAATAAGACCGATTCGGTATGGAAAC
1196104
Left flanking sequence : Till position 1194903 (length
bp)
GTTTATAAATGAGGATAGTTATTTACCCTTAGAAAAATATGGTGCCGAAAAGTATAAATATAAGAAAGAT
AATAAAAAATAAGTTGTGAATGATTGCCTT
Right flanking sequence : From position 1196104 (length
bp)
TTCTCTTCAACTATCCAACCGATTCTTCTCTGCCCATCCAGTTAAAATCAGACCTCTTTGAGGATGGAAA
CATTTCACAGTAATACCATCCAGACCACGT
Print the CRISPR sequence : From position
bp To position
bp