CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_013940_1
Flanking alignement tool
Page manual
  
Home Page
NC_013940_1                                                                                                                 
top
Strain :
Deferribacter desulfuricans SSM1
RefSeq :
NC_013940 (plasmid megaplasmid )
CRISPR id :
NC_013940_1
DR consensus (30 bp) :
GTTTCAACTCCTGATAGGTACAATATAAAC
Number of repetitions :
8
Begin Position :
77878
End Position :
78375
77878
AAATTAATTCCTAATAGGTACAATACAAAC
AGAACACCTAAAATAATTACCACAACTATAACTTCTGT
77945
77946
GTTTCAACTCCTAATAGGTACAATATAAAC
AAAAATCACCATTACATCATTTATTGCTTTTGTAAT
78011
78012
GTTTCAACTCCTGATAGGTACAATATAAAC
ACTGATTATTTTGAGATATGGTGGGATGCAGATAAATT
78079
78080
GTTTCAACTCCTGATAGGTACAATATAAAC
AAAGTTTAATAAAAAGGAAAGATGTGTCGGATATAA
78145
78146
GTTTCAACTCCTGATAGGTACAATATAAAC
TGAAATGATGTATTTGATGAAAGTGATACAACGTG
78210
78211
GTTTCAACTCCTGATAGGTACAATATAAAC
GTGCTTAGTAATACTAATACACAAATATTTTTGAAAAC
78278
78279
GTTTCAACTCCTGATAGGTACAATATAAAC
AGCTCAACAAAAATAGCATAACTACTAGCTGTAAGCG
78345
78346
GTTTCAACTCCTGATAGGTACAATATAAAC
78375
Left flanking sequence : Till position 77878 (length
bp)
ATCTAACAAGAAATTCATTGATGCAGTTAATAAAATAGTTTGAAAATTTAAAATTTTCTATATTCTGGAA
TTTAGAATGTTATAATAAACCAAAAATATT
Right flanking sequence : From position 78375 (length
bp)
CCTTATCTCTAAAAATATTCAATTTTCAAACAACTTGTTGTTGTCTCTATATTATTATTATATCAAAAAG
TACAAAAAATTTCAAAATTTTTACATAATT
Print the CRISPR sequence : From position
bp To position
bp