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CRISPRs details
NC_013949_1
Flanking alignement tool
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NC_013949_1                                                                                                                 
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Strain :
Helicobacter mustelae 12198
RefSeq :
NC_013949 (chromosome circular)
CRISPR id :
NC_013949_1
DR consensus (36 bp) :
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
Number of repetitions :
11
Begin Position :
24706
End Position :
25400
24706
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TAGAGTTAGTAGTTCTCTTTTTCTTTCCT
24770
24771
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TGAGCTATACGGATTGCAAAGATTCTTTTT
24836
24837
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
GCTGCGGTCTTGATTATTGGTAGCATTCGT
24902
24903
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TTTAAAGTTTTGCGGCGATGAACTGCATGT
24968
24969
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
CTTGCTCCACCCACACGTTATACTTGCTAG
25034
25035
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TCAACGCCTGCAATATTGTAATTAATCTTC
25100
25101
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
CCCTTCTTGGTTTTGATGCCACTCTAAACG
25166
25167
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TCGTAGCGTTATCTTTCCCATGCACAGCAT
25232
25233
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TGATGCAGTTGCAACACGTAGAAAGAGTCT
25298
25299
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
TTGGAAAAACTTTACATAGAGACCCGCATA
25364
25365
GTTTTAGCCACTTCATAAATATGTTTATGCTAAAAT
25400
Left flanking sequence : Till position 24706 (length
bp)
GAGGGAGGTTTTTGGAGTTTTGATTGTTTTTCTCGCAGAAATGACTAGGGAGCATTTGGTATTGCTTGGC
TTGAGCTAGGATTTGTATTTCATGCCAAGC
Right flanking sequence : From position 25400 (length
bp)
ACACCTCTTGAGGATCCCCTAAAGAAGGGAGTTTCAGGAGGTGGGATGTGGCTAAAATAAAGAGTTTTCG
GTCCTCTGTGGGGTAACTGCCTAGCATCCC
Print the CRISPR sequence : From position
bp To position
bp