Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_013961_4                                                                                                                 top


Strain : Erwinia amylovora RefSeq :NC_013961 (chromosome circular)
CRISPR id : NC_013961_4
DR consensus (29 bp) : CGGTTTATCCCCGCTCACGCGGGGAACACNumber of repetitions :37
Begin Position : 2914480 End Position : 2916704

2914480GCGGTTTATCCCGCTCATGCGGGGAACACCATCACGCGCCATTCGGAACGTTACTTTATCA 2914540
2914541CGGTTTATCCACGCTCACGCGGGGAACACAGACAATGCCCTCACCGTTGTGTGTGAAGAAA 2914601
2914602CGGTTTATCCCTGCTCACGCGGGGAACACGGCGTCAGAGTCCGTTGATAAGATCTCAATCT 2914662
2914663CGGTTTATCCCCGCTCACGCGGGGAACACAGCAGTACGTTGACTGTAAAGGGTACAAAAGC 2914723
2914724CGGTTTATCCCCGCTCACGCGGGGAACACGATAAAGGCCGGATGGGATTCTGGCTGCTTCA 2914784
2914785CGGTTTATCCCCGCTCACGCGGGGAACACGAAAACATCGTCCCTGAAAGACTCTGATTCAA 2914845
2914846TGGTTTATCCCCGCTCACGCGGGGAACACATCTGGTGGCAATTCGACATTCTCACCGAAGT 2914906
2914907CGGTTTATCCCCGCTCACGCGGGGAACACATTGCTGGATAGAGGCAGCCCAGATAGACAGC 2914967
2914968CGGTTTATCCCCGCTAACGCGGGGAACACGCTCATTGCCAGCTCACTGCGGATTTTCGCGG 2915028
2915029CGGTTTATCCCCGCTCACGCGGGGAACACAAGAACGTCAACAATTGGCATTGTTCGATGTA 2915089
2915090CGGTTTATCCCCGCTCACGCGGGGAACACTTAATCACATCCAACGATACATTCAACGTAAC 2915150
2915151CGGTTTATCCCCGCTCACGCGGGGAACACTCTGAGTAACAACGCAAAGCCCTCCCCGAGGG 2915211
2915212CGGTTTATCCCCGCTCACGCGGGGAACACAAAAAAAGATAGATGACATGCGCAAATTTTTG 2915272
2915273CGGTTTATCCCCGCTCACGCGGGGAACACGTCACATTCCGTATGGCTCGTGACGCCATCAG 2915333
2915334CGGTTTATCCCCGCTCACGCGGGGAACACGTCGAACTTCGTTGAGGTTTCAGGCAAATCGT 2915394
2915395CGGTTTATCCCCGCTCACGCGGGGAACACTCGTTAAATTCCGTCCATGTATGCGAGAGTTT 2915455
2915456CGGTTTATCCCCGCTCACGCGGGGAACACGTAATCAAATTTGGCGGAGAGGATTTTACAAT 2915516
2915517TGGTTTATCCCCGCTCACGCGGGGAACACTCCTGGAAAACATGAGGGATGAGAATGATCTC 2915577
2915578CGGTTTATCCCCGCTCACGCGGGGAACACATTGCAGCATCGGGCCGAGCCACAGGACATTT 2915638
2915639CGGTTTATCCCCGCTCACGCGGGGAACACGGGGCATCTCCGCCGACATTTCCGCCAAATCT 2915699
2915700CGGTTTATCCCCGCTCATGCGGGGAACACGATTTTGTCAGTTGTATAAGCATGCTCCTTTA 2915760
2915761CGGTTTATCCCCGCTCACGCGGGGAACACAGCCGTCTGCGCCAAGAACGGACAACCATTTA 2915821
2915822CGGTTTATCCCCGCTCACGCGGGGAACACTAACTAGCAGACGATCTTTAAGTCTCTGCAAC 2915882
2915883CGGTTTATCCCCGCTCACGCGGGGAACACTCAGGTTTATTACGGGCGGGCGGTTGGCTTTT 2915943
2915944CGGTTTATCCCCGCTCACGCGGGGAACACTACCCTGCCGCTCCGCGTACTCCCTCATCGCC 2916004
2916005CGGTTTATCCCCGCTCACGCGGGGAACACCTGGCGGGTTAGCGGTGATTTTAAATTTCAGT 2916065
2916066CGGTTTATCCCCGCTCACGCGGGGAACACCCGCCGAGACAACCGGCTATCCGAAATACCTG 2916126
2916127CGGTTTATCCCCGCTCACGCGGGGAACACCGTGGGGGGGTAAGGGGGGTGTTGTCTTTTGT 2916187
2916188CGGTTTATCCCCGCTCACGCGGGGAACACGCTGTGAACAATTTCAGTGCTCATGCGCAATC 2916248
2916249CGGTTTATCCCCGCTCACGCGGGGAACACGCTGTGAACAATTTCAGTGCTCATGCGCAATC 2916309
2916310CGGTTTATCCCCGCTCACGCGGGGAACACTTAAACCTACTGAAAAACAGGTTGATCGCTTG 2916370
2916371CGGTTTATCCCCGCTCACGCGGGGAACACTTTTATGGAGATAATTAATGTCAAAGCATCTT 2916431
2916432CGGTTTATCCCCGCTCACGCGGGGAACACTTTTATACAAAAAACACAGTTCCCGAGATGCT 2916492
2916493CGGTTTATCCCCGCTCACGCGGGGAACACTCCATCACTCGCCGCCCTCCGCTTCTGCATAG 2916553
2916554CGGTTTATCCCCGCTCACGCGGGGAACACATTGATAAATTATTTATCATTTTGCTATTTAC 2916614
2916615CGGTTTATCCCCGCTCACGCGGGGAACACCATGCCGCGAAGATAAAAAGGCTCATGAATAA 2916675
2916676CGGTTTATCCCCGCTCACGCGGGGAACAC2916704
Left flanking sequence : Till position 2914480 (length bp)
TCCCCCCATGCTGTGACCAAAAAACGCGATCTGTTTGTCACATATGGTATCCAGCGCCTGTAAAGCGGCG
TCGGCCAGTTGCTCAATACTGTCCGGCATG
Right flanking sequence : From position 2916704 (length bp)
TCTAAAACTATCTGACTGATCTTAGTGATTTTTTTACCGCCCTACAATTCTACCAACTTTTTTCCACTTT
AAAGCACGCACGGATTTGCTACTCAAAACG

Print the CRISPR sequence : From position bp To position bp