Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014029_3                                                                                                                 top


Strain : Yersinia pestis Z176003 RefSeq :NC_014029 (chromosome circular)
CRISPR id : NC_014029_3
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :8
Begin Position : 2721665 End Position : 2722112

2721665TTTGATTATTGCCTGTGCGGCAGTGAACTCAGGGGACTGGCGAACAATGTCTTTCATGAT 2721724
2721725TTTCTAAGCTGCCTGTGCGGCAGTGAACGAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT 2721784
2721785TTTCTAAGCTGCCTGTGCAGCAGTGAACATTATCTGAATGGCATTTTCTTTGGCGCAGAT 2721844
2721845TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGCCATTCCGTGAACCTGAGCGCGTTCGCGA 2721904
2721905TTTCTAAGCTGCCTGTGCGGCAGTGAACATATTCTCGAGCGATAGCAATAGCCATTCCAC 2721964
2721965TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGGTCAAACAAATTTAGGCGACGATTTAACA 2722024
2722025TTTCTAAGCTGCCTGTGCGGCAGTGAACAAAAAGAATTTGGGATTAAAGTTACCCATCAG 2722084
2722085TTTCTAAGCTGCCTGTGCGGCAGTGAAC2722112
Left flanking sequence : Till position 2721665 (length bp)
AAGTCAGTAATAAAAGATGCCATTCTCCCTGTTGTCAGTTACAAAATGCGCTTCCGCTCGCAATTTTGCT
CCCCAAATAGCATCAGCACATGGCCCAGGA
Right flanking sequence : From position 2722112 (length bp)
AGTAAGATAATACGATAACATCCTGTTTGTAAAATACTTATTTCGCTAATGGGGAAAAAACCCTTTTTTT
AGACCACCGATAACCACAATGTAAAATCAA
Print the CRISPR sequence : From position bp To position bp