Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014122_10                                                                                                                 top


Strain : Methanocaldococcus infernus ME RefSeq :NC_014122 (chromosome circular)
CRISPR id : NC_014122_10
DR consensus (30 bp) : GTAAAATAACGCCCCTAAGGGGATGGAAACNumber of repetitions :19
Begin Position : 885289 End Position : 886549

885289GTAAAATAACGCTCCTTAGGGGATGGAAATTTAAGCTCGAGATGCAAATCATAATCACAACCAGTTTCC 885357
885358GTAAAATAACGCCCCTAAGGGGATGGAAACGAAAGTATAAGGAATTGAATGATGAAGATAGAAAAAAGATTT 885429
885430GTAAAATAACGCCCCTAAGGGGATGGAAACGTATCTATCTCAATCTCATCCTCATCTAAAA 885490
885491GTAAAATAACGCCCCTAAGGGGATGGAAACCTTTTGTGAATTTTGAATAATCGTTTAAAATGCTCTCTATAA 885562
885563GTAAAATAACGCCCCTAAGGGGATGGAAACTATAACCAATCCAAAATAGCACTATTGATAATAGTATA 885630
885631GTAAAATAACGCCCCTAAGGGGATGGAAACGGATATGAGCGTTTCTCCTCTTGGTAATTGCATCAAGTCCGA 885702
885703GTAAAATAACGCCCCTAAGGGGATGGAAACTCAATATCAATTTTCTTATGAATTATTACATTCGG 885767
885768GTAAAATAACACCCCTAAGGGGATGGAAACTTTATATACGTATTTTTTTCTTAATAAATTTATCCAGTAAAA 885839
885840GTAAAATAACGCCCCTAAGGGGATGGAAACGTGATTCTGATGATCTTTCCACCAAGTTTTACATCTAG 885907
885908GTAAAATAACGCCCCTAAGGGGATGGAAACGCTCTCTACATAATGGACAAGATTGCATTCACAAGAGCAAG 885978
885979GTAAAATAACGCCCCTAAGGGGATGGAAACAGGGCAGCCCCAGGCTGCCCCTCATGGGAGAGCCTCCTCC 886048
886049GTAAAATAACGCCCCTAAGGGGATGGAAACAAAGATAAGAGGGAGGAACTCAAGCCCTCCCCCTT 886113
886114GTAAAATAACGCCCCTAAGGGGATGGAAACATAAATGGCGCTAATATTGATGTTGCAATTGTTTTTTTA 886182
886183GTAAAATAACGCCCCTAAGGGGATGGAAACTATCTAATGACTAACGCGGATAATCCTCCCAACACTA 886249
886250GTAAAATAACGCCCCTAAGGGGATGGAAACTATCTAATGACTAACGCGGATAATCCTCCCAACACTA 886316
886317GTAAAATAACGCCCCTAAGGGGATGGAAACTATTATCTATTTTATACTTGCTAATCTTAATATACCTT 886384
886385GTAAAATAACGCCCCTAAGGGGATGGAAACTATTATCTATTTTATACTTGCTAATCTTAATATACCTT 886452
886453GTAAAATAACGCCCCTAAGGGGATGGAAACCAAATATCGTTTTTTTTTACTTCAACTTTTGTTATAA 886519
886520GCAAAATAACACCATTAAGGAGACTAAAAT886549
Left flanking sequence : Till position 885289 (length bp)
TTTTTAAATAAATAGGAAAACCTAACCTTCATCCAGTTGATTAGGGATAAAGCTTATATACTATAAGAGC
GAATGTTATAAACAAGCAAAATTTTGCTTT
Right flanking sequence : From position 886549 (length bp)
AGCTCTTCTAAACACTTCAAAATTCTCTTATATTGTTCATCCAAGTATAAAAATTTATCAACATCTTCTT
TATCAGCTTTTTTAAGAAACTCCTCTTTCT
Print the CRISPR sequence : From position bp To position bp