Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014152_6                                                                                                                 top


Strain : Thermincola sp. JR RefSeq :NC_014152 (chromosome circular)
CRISPR id : NC_014152_6
DR consensus (30 bp) : GTTTCAATCCCTTATAGGTAGGCTAAAAACNumber of repetitions :4
Begin Position : 2572406 End Position : 2572636

2572406GTTTCAATCCCTTATAGGTAGGCTAAAAACCAGATTGGCTCGTTGCTTAATATGCTCTTCCACTTCAT 2572473
2572474GTTTCAATCCCTTATAGGTAGGCTAAAAACCCATCAAGAGTTGGACAACAGATCATAGGCTGCGTC 2572539
2572540GTTTCAATCCCTTATAGGTAGGCTAAAAACGATAGCCTATCATGTAGCGCACAGCCAGGCACCGAAA 2572606
2572607GTTTCAATCCCTTATAGGTAGGTGTTAAAG2572636
Left flanking sequence : Till position 2572406 (length bp)
CTTTTTCGAGGATTTTGAGTATTTCCTTCGAAGAATAACTCTTCATTTATGTTCCCCATCCTTTATCTTA
TTCTAATACGTATTATTTGCGCGTGTCAAT
Right flanking sequence : From position 2572636 (length bp)
CCCAAATTATATGTCGGCAACACTTGGGATTTTGACCAAAATATATGTCGGTATTGAAGGATATTTCCGC
CAATTAATCGAATCGGGACTTGGCATAATT
Print the CRISPR sequence : From position bp To position bp