Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014165_4                                                                                                                 top


Strain : Thermobispora bispora DSM 43833 RefSeq :NC_014165 (chromosome circular)
CRISPR id : NC_014165_4
DR consensus (31 bp) : GTTGCGATCCCTCTAGGGGTGATGAGCGGACNumber of repetitions :8
Begin Position : 575320 End Position : 575835

575320GTTGCGATCCCTCCAGCGGTAATGAGCGGACTTGTACTCGCGTTGGCGCAGCTTGACGAAACCGCTCCATTC 575391
575392GTTGCGATCCCTCTAGGGGTAATGGGCGGACAGAAGGGCAAGAGCGCGGCCGCGGCGGGCCGGATCAT 575459
575460GTTGTGATCCCTCTAGGGGTGATGAGCGGACTGGAGTCCGAGGACGGGCAGCGGCACACCCGAATCGAGGTGCGCGT 575536
575537GTTGCGATCCCTCTAGGGGTGATGAGCGGACCTGCGGATCATCGCATATATCAACGCCTCCAAGTC 575602
575603GTTGCGATCCCTCTAGGGGTGATGAGCGGACATGACAAATTTTTCCGGATCCATCGCGTACCATGAGAT 575671
575672GTTGCGATCCCTCTAGGGGTGATGAGCGGACCCGCACCTGCTGGGACCTGGGCGACCCTGCCTCGCACC 575740
575741GTTGCGATCCCTCTAGGGGTGATGAGCGGACGCTGACCGTCCTGCCCGTGCTCCCAGTAGCCAT 575804
575805GTTGCGATCCCTCTAGGGGTGATGAGCGGAC575835
Left flanking sequence : Till position 575320 (length bp)
GGACCCGGGTCCGGCAACGTCTGGTACGTCGGCAGGTGCAACTGGTTGCGATCCCTCACAGGGACTGGCG
CCCCGCATGGGCGCTCGCACTCACCAGGTA
Right flanking sequence : From position 575835 (length bp)
CCCAAGGTAAAGTCGCAGGTCGCGACCGGTGTGGGCGGGTCCGCTGGGCCCGGATTTGCAGCAGACCGGC
GGTTGTGCAGAAGTGCAGGTCAGAAGGGTC
Print the CRISPR sequence : From position bp To position bp