Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014210_13                                                                                                                 top


Strain : Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RefSeq :NC_014210 (chromosome circular)
CRISPR id : NC_014210_13
DR consensus (29 bp) : GTGAGCCCCGCGCACGCGGGGATGAACCGNumber of repetitions :30
Begin Position : 2013511 End Position : 2015306

2013511GTGAGCCCCGCGCACGCGGGGATGAACCGGGCAGCAGGTCCTCCAGGGAACCGCCGCCCCG 2013571
2013572GTGAGCCCCGCGCACGCGGGGATGAACCGCACTCGCCTTCACTCTGTCGAACGACCGGTC 2013631
2013632GTGAGCCCCGCGCACGCGGGGATGAACCGGTCTGATCACGTCTATGGTGGTCGGTCTTCG 2013691
2013692GTGAGCCCCGCGCACGCGGGGATGAACCGTTCACCCCCCGGCGTCCGGTGACCCGTGCTCC 2013752
2013753GTGAGCCCCGCGCACGCGGGGATGAACCGCGCACGTCGATGCTCCCCGAGACGCGGCGGGA 2013813
2013814GTGAGCCCCGCGCACGCGGGGATGAACCGCCGGGGCGGGTCACGGACGTGTACCTGCTCCA 2013874
2013875GTGAGCCCCGCGCACGCGGGGATGAACCGCCGGGGCGGGTCACGGACGTGTACCTGCTCCA 2013935
2013936GTGAGCCCCGCGCACGCGGGGATGAACCGGCCATGCTCGCGTCCGAGACCCGCAAGATCCA 2013996
2013997GTGAGCCCCGCGCACGCGGGGATGAACCGGTGACGTCGTCGGGCGTGTAGAGCTCGCGCTT 2014057
2014058GTGAGCCCCGCGCACGCGGGGATGAACCGACTTGCCCCCCGTTGGCCCTACTGCTGTCTCT 2014118
2014119GTGAGCCCCGCGCACGCGGGGATGAACCGGCGTTCATCAGCTGAGGCTCACCGGCGGCGGG 2014179
2014180GTGAGCCCCGCGCACGCGGGGATGAACCGATCCCGGCCAGCCCCCTGCTCAGGTTGCCGCT 2014240
2014241GTGAGCCCCGCGCACGCGGGGATGAACCGGGATTGACGGGGTTCGTAGCCGGTGACGATTC 2014301
2014302GTGAGCCCCGCGCACGCGGGGATGAACCGGCTCAGCCCACTGAGGGCTGAGAGGTCACCGC 2014362
2014363GTGAGCCCCGCGCACGCGGGGATGAACCGAGCATCATGCCCGTCTGTGCGGGGGAGCCCAC 2014423
2014424GTGAGCCCCGCGCACGCGGGGATGAACCGCCGCAGGTCGAGAGGTACAGGTCAATCTCGGT 2014484
2014485GTGAGCCCCGCGCACGCGGGGATGAACCGGGGCGACAGACCACCCGGCTACCAACCGTGTC 2014545
2014546GTGAGCCCCGCGCACGCGGGGATGAACCGGAGGAGTTCGCCTACGCCATCGCTGGGTCGGG 2014606
2014607GTGAGCCCCGCGCACGCGGGGATGAACCGTACGGCCAGCCGGTCGGTCCCTACCGCATCGC 2014667
2014668GTGAGCCCCGCGCACGCGGGGATGGACCGTGCGCGGCCACGTACCCGGCGAGGTCGATCAC 2014728
2014729GTGAGCCCCGCGCACGCGGGGATGGACCGGGATGACGCAAGCCGAGATCGTCCGGGCCACG 2014789
2014790GTGAGCCCCGCGCACGCGGGGATGGACCGCCATCGACAGGGGCACACGCCCCGCCGACCTA 2014850
2014851GTGAGCCCCGCGCACGCGGGGATGGACCGGCCATCGCGATCGCCGCTGTCCTGGGCATGCA 2014911
2014912GTGAGCCCCGCGCACGCGGGGATGGACCGGCGACCCCCGCTGACGCTCCCATCGTCGTCTC 2014972
2014973GTGAGCCCCGCGCACGCGGGGATGGACCGCCCCTCCAGCGCAAGCTGGGCGTGGACGCTGA 2015033
2015034GTGAGCCCCGCGCACGCGGGGATGGACCGATGATGGTGGTGGCGTTGGACGCCGGGGCGGG 2015094
2015095GTGAGCCCCGCGCACGCGGGGATGGACCGACATCGACCTCCTCACCGCAGAATCCCCCCAC 2015155
2015156GTGAGCCCCGCGCACGCGGGGATGGACCGGCCGTCAGCGTGGAACTCAGAGGCGTATGGGA 2015216
2015217GTGAGCCCCGCGCACGCGGGGATGAACCGCGGGCCATCTGCATGGCGGCCTCTTCGGCGAC 2015277
2015278GTGAGCCCTGTGTACGCGGGGATGGACCG2015306
Left flanking sequence : Till position 2013511 (length bp)
TGCACTGTGTGAGGATGTACGTCGAAGCCGGGAGTGCTCAGCATGTCCAGGGCCAAGGTTGCGGCGAGAT
AACGGCCCGCGTTGCCGCAGGTCGTTAAGC
Right flanking sequence : From position 2015306 (length bp)
GTGACCGTGAGTGGCCACTGTGCGTTCGTGGCGAAGCGTGGTGTTCTCGGGGCGGCGGACGCAGAGAACC
CCACCTACCGAGAGGGAGGTGGGGTTTGTT
Print the CRISPR sequence : From position bp To position bp