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CRISPRs details
NC_014538_3
Flanking alignement tool
Page manual
  
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NC_014538_3                                                                                                                 
top
Strain :
Thermoanaerobacter sp. X513
RefSeq :
NC_014538 (chromosome circular)
CRISPR id :
NC_014538_3
DR consensus (30 bp) :
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
Number of repetitions :
63
Begin Position :
2342830
End Position :
2346967
2342830
CACTATTTTCAGGATAGGTAAGCTAAAAAC
AATGAAATTCAAATCTTCAACAGTAAAGATTTTGGC
2342895
2342896
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CACATACAGGACATTCCCACACCCGCTCCGATAACT
2342961
2342962
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AAGATTAGCTATTCTTCAACATCCACAGTATCCCTTCA
2343029
2343030
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GAAGAAGTTTTCTTTTATAGATTGTTAGTGGTTTG
2343094
2343095
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GAAAGAAGATTTTCACAGCATGGCACTTAAAACAG
2343159
2343160
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TCTCAAGGCAACAGGTAGTACACCACAAACAGGAAACA
2343227
2343228
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CTGTGGTGACATGCTTTTTAAAGCTTCTGCCTCATTG
2343294
2343295
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TACAATGTTGCCCTTCTACTTGCAGCTCTAACACGG
2343360
2343361
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GTAATGTGGATGGTATATTGTCATGGAGGTGGAGATA
2343427
2343428
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CCATTTCTATGCTTGCAATTATGCGGGCGAAGGAAA
2343493
2343494
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CAGCGCCTAAAACCAAAATTACGTTTTGCATTGTAGG
2343560
2343561
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ATTTTGCATTCACCTTCTTCAATTTTCTTCTCTGA
2343625
2343626
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTCTCTGCTTATAACAGTCATTTTCTGTCATGAATTTT
2343693
2343694
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AGCGCCATCATACTCGATTTCCTGCCGTATCACAAAA
2343760
2343761
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AAGCAATCACCGGCAAAACCAACTGGTATGATGCACC
2343827
2343828
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GAACAAGATGTACATGGAGCATATACCGATATCTA
2343892
2343893
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TCCTTTTTCTTGCCATTAAAATCACTCCTAAATGTA
2343958
2343959
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CTAAAGTGTAGTTTGTATCTCTTACAATCGTTGCGG
2344024
2344025
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ATTTTTTGAATTTGAAATTCACGAGTCAAAGGGT
2344088
2344089
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GGGTTGTGCTTTAAAAAGTTTATGATTAACACTACA
2344154
2344155
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ATATAGGCCCTGAAATTCCTCTGGTAGTGCTTCTCT
2344220
2344221
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CAAAAAGCGCAAGGGGAGCAACAACAAGAACCTAT
2344285
2344286
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCGTCCACCTGTAAGTGCAAAAGAATGGGTGGAAGAAA
2344353
2344354
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CCAGCGTGAGTCAATTTATTCCGTATTCAGTGCGGG
2344419
2344420
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GTGAGGAGCGCCAAGAAGACGAGCAGGCGGTGCAAA
2344485
2344486
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CATACAGTTCCCCGCAAAGAAGTAGCTCCAGCCTG
2344550
2344551
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCCGGGATGAATACACACACATCGGCGCCAGCCGA
2344615
2344616
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GGCTAATAAAATGATTTTGCAAGCATTAAAAAGACA
2344681
2344682
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ATACTCCTTATTTGCCTGTCTATCATCCTTAAATCT
2344747
2344748
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CAACTCTGTGGATACACGTCAACCATGTTTGTTTT
2344812
2344813
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CAACACATGAGAGTAGACGGAAACGATGATGATAGTC
2344879
2344880
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CGGCAGGCCATATTGATGTTAGTAGCACATCTCTA
2344944
2344945
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TATTTATATGCTCCTGTACGCATGGCGAGCTGAATA
2345010
2345011
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AAAGAAGAGCTTGAAAAGGAGGAGATGAATTCAGAA
2345076
2345077
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TCATAGATACCGAATACGTCAAAGTTCTTGAAGACT
2345142
2345143
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTATAAAGCTCAACTACTTCTTTTGGTGTTATATTCAA
2345210
2345211
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CTGGGGAAGTCTTTAATGAACCTGTGCAGGAATA
2345274
2345275
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CCCCCTTGGGTATTTCTACGTAACCGAGATTGAGCG
2345340
2345341
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TAGTCCCATGTTACCCATGCTCCAGATGCGGAATACTT
2345408
2345409
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCAGGCTTGGACACTCTTACAAGGTACTTTTACTC
2345473
2345474
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GAAGGTTGCCTGGGCTATGTGGACAATCCAGAAGGCA
2345540
2345541
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCGTAGTAGTTTACAATTACAAGTTTTAACTTCAAA
2345606
2345607
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GGAGTCTTGGAAAGGACTCCATTACTTCGAACTCGA
2345672
2345673
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CCATCACGGATGCACTAAAACCGGCTAAATTCAGCG
2345738
2345739
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTAAAACGTTCTGGAACTGTTCTTGTACGCTATCCGCA
2345806
2345807
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GACATAGTATGGAACAAAAGGGTTTTAAGTTCGACG
2345872
2345873
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCTGCTATGACTATCCCAACAGGGCCAGTTATTAGAG
2345939
2345940
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CCATCCATTTTACAAAGCAGTATATATCACAAAATAGA
2346007
2346008
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TAGGCAATAGTTTATACGTCTAAAACAAAATCAAAG
2346073
2346074
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ACTCTCTCATCGACGACCTCCGCATCTCCAACCGTG
2346139
2346140
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TCATCTGCCGTCAGCCACTCTTTTAGCACTTTGCCT
2346205
2346206
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GGCGTAGATAACCCAGACAGGCAGTACACCATAGCAA
2346272
2346273
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CGTAGTTTTTGAAGAAGTAAAGGAGGATTACTCTT
2346337
2346338
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GCATTAAACGGGATTTGGGGGATATAGGGTTTCACA
2346403
2346404
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTGCAAGCTAATCATAAAGAAAATAAAGTCCCTTTTGG
2346471
2346472
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GACAATGGTATACCACTTAAGGAATGCGTATCAGA
2346536
2346537
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CACTTTTAAAGCAAGGAGCTTTAAAAGGACTTTCTAT
2346603
2346604
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTAGCCAGCTTTTTATTTCTGTTGTAGAAATTTTATT
2346670
2346671
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CTACATCTAAGAGTGGACGGAACCGAAGAAAATAGTC
2346737
2346738
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AAAGTGTATCTCCCAAGACCACCGATACAAGCAATCAA
2346805
2346806
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GTTCATTTAACTTCCCTCCTTCGCTGTTTCTATAGT
2346871
2346872
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TATTTCAGCATAGTTATTGCTATCCTGCTGGGCATA
2346937
2346938
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
2346967
Left flanking sequence : Till position 2342830 (length
bp)
TCTGCAGTGTCTTAACTTTTAATTTAACTTTATTAACCATTTATTTATCCCATATTTTTACATCGGTATG
GGTTTAGTTTTTTGTTGCCTTTTTGAGAGA
Right flanking sequence : From position 2346967 (length
bp)
AACCAAACTTGAAAAAAGCTGCATTTTTCAAGTTTAGTTTCAATTCCTTATAGACTCCCATGCCGCAAAT
GCAGCACCAGCAGAGGATGAAAATGTCCTT
Print the CRISPR sequence : From position
bp To position
bp