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CRISPRs details
NC_014616_1
Flanking alignement tool
Page manual
  
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NC_014616_1                                                                                                                 
top
Strain :
Bifidobacterium bifidum S17
RefSeq :
NC_014616 (chromosome circular)
CRISPR id :
NC_014616_1
DR consensus (36 bp) :
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
Number of repetitions :
45
Begin Position :
225803
End Position :
228741
225803
TTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ATATCTAACCACGAATATAGTTAGACATGA
225868
225869
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CCAGCAGGCCAAGTTAAGCGGCGTGAGTTT
225934
225935
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACTCACCCCAGCGGCGGCGATCACCGACTT
226000
226001
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACATACGTGCTCTTCTTTTTCTGCTGCTGTA
226067
226068
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GTCACATAGCAGCTACCAAACGTCACGTCA
226133
226134
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GCAGTCCGAAATTGTTAGCGGTGCGTCAAA
226199
226200
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACAATGCTGGCCATGCCGTTGAGATTGTTG
226265
226266
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TGTATTTCGGCTGCAATAACATCACCACAA
226331
226332
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ATTAGAGAACGCCGTTGCGGCGAAACTCTT
226397
226398
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GTTAAGTCGTCATCCATTTGTGTTTGGGTA
226463
226464
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
AACAACACACACACAGAGCAGCAGTG
226525
226526
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CTAAATCACAGCAGAAACCAAGCTCCCAAA
226591
226592
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
AGGACAGCGCGTCGACATCCAACGATGCGA
226657
226658
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TACGCGGCAATATCTGGGTTTTAAGTCTAT
226723
226724
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TCATGCGTGGAGAATTGTCCAGTGAAAGAA
226789
226790
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACAAAGGGTGCGTTATTGCAAGCCGGTATG
226855
226856
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACTTGACTTCGGGCGAACAGAACAGTACAA
226921
226922
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CCTCGATGGGTGCATCCAGATATCGCGCGA
226987
226988
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TAATAATATGCTGGACATGCAAATAATGGT
227053
227054
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
AAATGTACCGCAATGAAACGGATGCGACAA
227119
227120
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TGCTGGGCGAGTTGCAGCAGCGCGTCCGCG
227185
227186
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CCGTATGCGTATACGTCGCGTTGACCGAAA
227251
227252
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TCGATTGACGACAGGTGTTACAATATGGAG
227317
227318
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CTATGCCCGAAGTGATATGCGGGTAGTACG
227383
227384
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ATATGGGTCGCACCCATCACGTTAGACGGG
227449
227450
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CGCATGCGACATACTCAACACACGTTTCGA
227515
227516
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TGTTGTTTCTTCATAACTAACAATATAGCG
227581
227582
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CGCCTCATCGACCCACTGCGCCATCAGCGTG
227648
227649
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GCCGAAGATTGCTCGGAACGGTCGGGCCGTA
227715
227716
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACATATCTCCAGCCAGCGCTCATCCACGGT
227781
227782
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TGAATGTAACCGACATTCCGGCCTACGCCA
227847
227848
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GCGATATACATGCTGGTGTCAAAATGTACG
227913
227914
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GTGATATCATGAGTGGCGCGGGGTGGTGAC
227979
227980
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ATACACACACAACAGCAATGGGAAAAGCAA
228045
228046
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
AGATAATATCGTCCTCAACCACGTTACCGC
228111
228112
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TCTTTGTCTGTGTGCGTACTTTTATGGTGT
228177
228178
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ACCGTGTTTTCAGATTTCCCCGCGACGCAG
228243
228244
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TAGATTCGCGGCAGGTGTTACAATCTGGAA
228309
228310
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TTGCTGTTCTTCGTGGTCATGTTCGCTACC
228375
228376
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
CAGCCTATTTCGACCGTATCATAAAAGACA
228441
228442
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
GTTTTATTGCCGATATTGTCGGAAACTTCT
228507
228508
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
TGAAGAAACAGATAGGGGAATTTTATTATG
228573
228574
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
AGGTACCGCATATTGTCGGGGAATATTTCA
228639
228640
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
ATACGGGCTAAGCTGCCGCAACGCGGATGC
228705
228706
GTGGTCAAAGTCATTGATCTGACAGGCATCTGAAAC
228741
Left flanking sequence : Till position 225803 (length
bp)
TGCATCAATCGTTTCCCATATGTCACCAGAATCAAAAGCACACCCCGGAAGCTATCCAGAAGACAGCAAC
AGAGGTGCCCCTAACACTATTGCGCATCAC
Right flanking sequence : From position 228741 (length
bp)
CGATAGCCTTAAGGATTCCTGAACAGTTCATGAGAACTGAACGTAATCCTCATCGACATAGTGGCTCATC
CCCTCTGTCAGCATGACTTTCTTGCTGCAG
Print the CRISPR sequence : From position
bp To position
bp