CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_015949_11
Flanking alignement tool
Page manual
  
Home Page
NC_015949_11                                                                                                                 
top
Strain :
Caldicellulosiruptor lactoaceticus 6A
RefSeq :
NC_015949 (chromosome circular)
CRISPR id :
NC_015949_11
DR consensus (30 bp) :
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
Number of repetitions :
11
Begin Position :
2627611
End Position :
2628306
2627611
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
TTTAAATTTGCATTTAAATTAATCATTTGCTCTGTAG
2627677
2627678
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
AAGCAAAATTTCTCTTTTTGCCCTCGCACATACCAT
2627743
2627744
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
ACTTTTGCGTCTCTGACAGCTTGTCGTATAGCTTCA
2627809
2627810
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
ATTTTTAATTTAGACATCATTCTGCTTAATGACCCTA
2627876
2627877
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
GCTGAAATTGGAACTAAACCTAATGAAACTTTGATTTT
2627944
2627945
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
GCTTCTTTAAATAAATTGTATAAACTCTCTCTAAACT
2628011
2628012
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
TTATTATACCCCTTTTCTTGCTTTTGTAAATAC
2628074
2628075
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
ATGTTTGTTTGGTCAGCAGATGATGCCAAGAGCACT
2628140
2628141
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
AATCCTCTTTTGCTTTTGTTTGTTAGCTTGGGTATAA
2628207
2628208
GTTTGTAGCCTGCCCTTTGGGGATTGAAAC
AATGATTCTCAGTTCTTACGATGTCATAAGCATCATCTA
2628276
2628277
GTTTGTAGCCTTCCCTTTGGGGATTGAGGA
2628306
Left flanking sequence : Till position 2627611 (length
bp)
GATGCAACTGGGTTTGTGTTGATTTCTAAGGGGTGTATCAAAATAAAAACATTGACAGAGGTGCATAAAG
TTGACATAATAAAATCAGGCTTTTTAACCT
Right flanking sequence : From position 2628306 (length
bp)
GAGAGGGGAATTTGTAGCCTTCTCTTTGGGGATTGAGGTGGGGCTGGGGGTTGCAGTCTGCTCTTGGAGG
GATTGAGGAGAAAGGTGAGATCTCAGTTTT
Print the CRISPR sequence : From position
bp To position
bp